RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 PCDH10Q9P2E7 1040 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 ANGPTL2Q9UKU9 493 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 TBC1D30Q9Y2I9 924 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 CCDC189A1A4V9 331 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 SLC22A2O15244 555 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 CRTAMO95727 393 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 TIMP1P01033 207 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 F11P03951 625 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 ZNF37AP17032 561 aaPredicted RBP12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 IMPDH1P20839 514 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 PMLP29590 882 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 CDKN1CP49918 316 aaPredicted RBP12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 SUOXP51687 545 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 DSG1Q02413 1049 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 LAMB3Q13751 1172 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 TYSND1Q2T9J0 566 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 ZNF678Q5SXM1 525 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 CLEC6AQ6EIG7 209 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 ANO7Q6IWH7 933 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 FAM117BQ6P1L5 589 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 CYHR1Q6ZMK1 362 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 GLT6D1Q7Z4J2 308 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 TMEM150AQ86TG1 271 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 KYQ8NBH2 561 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 SLC26A7Q8TE54 656 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 MUC3BQ9H195 1237 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 EML4Q9HC35 981 aaKnown RBP12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 NDE1Q9NXR1 346 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 MED16Q9Y2X0 877 aa12.44□□□□□ -0.42
UBASH3A-209ENST00000635325 UBA6A0AVT1 1052 aaPredicted RBP12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 LRRC14BA6NHZ5 514 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 PPP6CO00743 305 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 SUPT7LO94864 414 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 SNUPNO95149 360 aaKnown RBP12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 SIX3O95343 332 aaPredicted RBP12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 OGNP20774 298 aaKnown RBP12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 ALDH1A3P47895 512 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 CDH13P55290 713 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 TAF12Q16514 161 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 SETMARQ53H47 684 aaPredicted RBP12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 UNC50Q53HI1 259 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 CHST9Q7L1S5 443 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 UBE2Q1Q7Z7E8 422 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 SDCCAG8Q86SQ7 713 aaPredicted RBP12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 SETD3Q86TU7 594 aaPredicted RBP12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 SLC22A9Q8IVM8 553 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 CEP70Q8NHQ1 597 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 HMGCLL1Q8TB92 370 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 LPGAT1Q92604 370 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 L3HYPDHQ96EM0 354 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 ZFRQ96KR1 1074 aaKnown RBP12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 AARSD1Q9BTE6 412 aaKnown RBP12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 RETREG1Q9H6L5 497 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 RIMKLBQ9ULI2 386 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 RAI2Q9Y5P3 530 aa12.43□□□□□ -0.42
UBASH3A-209ENST00000635325 TRIM43BA6NCK2 446 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 UBXN8O00124 270 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 MAP3K7O43318 606 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 FKBP6O75344 327 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 TMCC1O94876 653 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 LUC7L3O95232 432 aaKnown RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 MT-CO1P00395 513 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 C1RP00736 705 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 SOD2P04179 222 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 MTHFD2P13995 350 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 MZF1P28698 734 aaPredicted RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 FMO4P31512 558 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 DPP6P42658 865 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 HERVK_113P63132 956 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 TWF1Q12792 350 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 ILF2Q12905 390 aaKnown RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 TRAF2Q12933 501 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 RFTN1Q14699 578 aaPredicted RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 TAF1AQ15573 450 aaPredicted RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 SPOUT1Q5T280 376 aaKnown RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 PIANPQ8IYJ0 282 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 SNX31Q8N9S9 440 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 TRIM43Q96BQ3 446 aaPredicted RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 ERVK-6Q9BXR3 956 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 MEAF6Q9HAF1 191 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 GALPQ9UBC7 116 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 IKZF3Q9UKT9 509 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 FAM50BQ9Y247 325 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 FNDC3AQ9Y2H6 1198 aaKnown RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 TRAF6Q9Y4K3 522 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 MICAL3Q7RTP6 2002 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 STX16-NPEPL1H3BU86 382 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 BMP1P13497 986 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 ADSLP30566 484 aaPredicted RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 MSX2P35548 267 aaPredicted RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 THOP1P52888 689 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 ZXDBP98169 803 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 NFKB2Q00653 900 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 PDAP1Q13442 181 aaKnown RBP12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 BLMHQ13867 455 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 IKBKEQ14164 716 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 HERC3Q15034 1050 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 AAGABQ6PD74 315 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 PAQR3Q6TCH7 311 aa12.42□□□□□ -0.42
UBASH3A-209ENST00000635325 GK5Q6ZS86 529 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms