RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 TNFRSF12AQ9NP84 129 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 SPAG4Q9NPE6 437 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 CATSPERZQ9NTU4 200 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 TRMT13Q9NUP7 481 aaKnown RBP8.07□□□□□ -1.12
GPC3-204ENST00000631057 PLK2Q9NYY3 685 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 CROTQ9UKG9 612 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 CNOT11Q9UKZ1 510 aaKnown RBP8.07□□□□□ -1.12
GPC3-204ENST00000631057 PRG3Q9Y2Y8 225 aaPredicted RBP8.07□□□□□ -1.12
GPC3-204ENST00000631057 SLC4A7Q9Y6M7 1214 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 DNAH12Q6ZR08 3092 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 ZFC3H1O60293 1989 aaKnown RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 SMIM31A0A1B0GVY4 71 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 CCDC162PA2VCL2 907 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 E7ENX8 843 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 H0YJX3 145 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 FBP2O00757 339 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 TRIM24O15164 1050 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 CA12O43570 354 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 NRP2O60462 931 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 DNAJA2O60884 412 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 TRPA1O75762 1119 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 CRTAMO95727 393 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 NDST3O95803 873 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 GOT2P00505 430 aaKnown RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 SLC4A1P02730 911 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 SERPINF2P08697 491 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 PABPC4LP0CB38 370 aaKnown RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 HSPA8P11142 646 aaKnown RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 COL6A1P12109 1028 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 CD1DP15813 335 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 TACR2P21452 398 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 PMLP29590 882 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 OR1E1P30953 314 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 MSX2P35548 267 aaPredicted RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 ETFBP38117 255 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 FLT3LGP49771 235 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 POLE2P56282 527 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 NAA20P61599 178 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 FAM189BP81408 668 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 IHHQ14623 411 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 UNC50Q53HI1 259 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 IRAK1BP1Q5VVH5 260 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 ALG1LQ6GMV1 187 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 PRMT9Q6P2P2 845 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 FBXL19Q6PCT2 694 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 TMEM207Q6UWW9 146 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 LARP4Q71RC2 724 aaKnown RBP eCLIP8.06□□□□□ -1.121e-323■□□□□ 9.7
GPC3-204ENST00000631057 LDB1Q86U70 411 aaPredicted RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 PIM3Q86V86 326 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 MIB1Q86YT6 1006 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 LILRA2Q8N149 483 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 AHI1Q8N157 1196 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 PCDH20Q8N6Y1 951 aaKnown RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 HMGCLL1Q8TB92 370 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 BRSK1Q8TDC3 778 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 BLOC1S5Q8TDH9 187 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 NCSTNQ92542 709 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 PTERQ96BW5 349 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 ROPN1LQ96C74 230 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 DUS3LQ96G46 650 aaKnown RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 DNAJC1Q96KC8 554 aaKnown RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 SPATA17Q96L03 361 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 TBATAQ96M53 351 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 KLHL32Q96NJ5 620 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 PKP2Q99959 881 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 SH3GL3Q99963 347 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 AARSD1Q9BTE6 412 aaKnown RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 EFHD1Q9BUP0 239 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 EPB41L1Q9H4G0 881 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 TFB2MQ9H5Q4 396 aaKnown RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 INTS10Q9NVR2 710 aaKnown RBP8.06□□□□□ -1.12
GPC3-204ENST00000631057 GABRQQ9UN88 632 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 AP4S1Q9Y587 144 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 KCTD3Q9Y597 815 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 AP4B1Q9Y6B7 739 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 THSD7BQ9C0I4 1608 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 CROCCQ5TZA2 2017 aa8.06□□□□□ -1.12
GPC3-204ENST00000631057 TTC24A2A3L6 582 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 OR51F1A6NGY5 319 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 F5H5T6 163 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CCL22O00626 93 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 UBFD1O14562 309 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 AZIN1O14977 448 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 VPS4BO75351 444 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 TNFAIP8O95379 198 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 TBX18O95935 607 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 HMBSP08397 361 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 FGF4P08620 206 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 CKBP12277 381 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 ZNF37AP17032 561 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 TCN1P20061 433 aaPredicted RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 ACVRL1P37023 503 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 STC1P52823 247 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 RHDQ02161 417 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 SMARCB1Q12824 385 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 TAF10Q12962 218 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 DYNC1I2Q13409 638 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 MRPL58Q14197 206 aaKnown RBP8.05□□□□□ -1.12
GPC3-204ENST00000631057 PPP1R3AQ16821 1122 aa8.05□□□□□ -1.12
GPC3-204ENST00000631057 TYSND1Q2T9J0 566 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms