RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TAF4O00268 1085 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 ITGA2P17301 1181 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 KRT2P35908 639 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 HALP42357 657 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 METAP2P50579 478 aaKnown RBP eCLIP4.04□□□□□ -1.76
CCDC38-204ENST00000546816 CLCNKAP51800 687 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 RAD23BP54727 409 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 HNRNPH2P55795 449 aaKnown RBP4.04□□□□□ -1.76
CCDC38-204ENST00000546816 KRT24Q2M2I5 525 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 GRAMD1BQ3KR37 738 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 FAM72AQ5TYM5 149 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 HIST2H2BDQ6DRA6 164 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 FAM72DQ6L9T8 149 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 LRRC8DQ7L1W4 858 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 SLC26A9Q7LBE3 791 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 NFE4Q86UQ8 179 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 FAM72BQ86X60 149 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 TDRPQ86YL5 185 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 EPHX4Q8IUS5 362 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 OR2AK2Q8NG84 335 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 CDCA5Q96FF9 252 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 INTS2Q9H0H0 1204 aaKnown RBP4.04□□□□□ -1.76
CCDC38-204ENST00000546816 TKTL2Q9H0I9 626 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 PLEKHA4Q9H4M7 779 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 ABCF3Q9NUQ8 709 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 HCN3Q9P1Z3 774 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 SLC25A10Q9UBX3 287 aaPredicted RBP4.04□□□□□ -1.76
CCDC38-204ENST00000546816 FBXO9Q9UK97 447 aaPredicted RBP4.04□□□□□ -1.76
CCDC38-204ENST00000546816 POU2F3Q9UKI9 436 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 PADI1Q9ULC6 663 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 FAM96BQ9Y3D0 163 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 TFP02787 698 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 HOXC13P31276 330 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 PSMC2P35998 433 aaKnown RBP4.03□□□□□ -1.76
CCDC38-204ENST00000546816 IL15P40933 162 aaPredicted RBP4.03□□□□□ -1.76
CCDC38-204ENST00000546816 PPFIA1Q13136 1202 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 RNPS1Q15287 305 aaKnown RBP4.03□□□□□ -1.76
CCDC38-204ENST00000546816 HIST2H2ACQ16777 129 aaPredicted RBP4.03□□□□□ -1.76
CCDC38-204ENST00000546816 IRAK1BP1Q5VVH5 260 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 RGMBQ6NW40 437 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 SLC22A25Q6T423 547 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 KMT5CQ86Y97 462 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 SPATA6LQ8N4H0 392 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 HUS1BQ8NHY5 278 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 ALG14Q96F25 216 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 ZSCAN31Q96LW9 406 aaPredicted RBP4.03□□□□□ -1.76
CCDC38-204ENST00000546816 BPIFA1Q9NP55 256 aa4.03□□□□□ -1.76
CCDC38-204ENST00000546816 CNOT7Q9UIV1 285 aaKnown RBP4.03□□□□□ -1.76
CCDC38-204ENST00000546816 IGKV3D-20A0A0C4DH25 116 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 GOLGA6L9A6NEM1 432 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 LILRA5A6NI73 299 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 CAPN9O14815 690 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 GUCY1B2O75343 617 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 KRT5P13647 590 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 MYOD1P15172 320 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 DDX5P17844 614 aaKnown RBP4.02□□□□□ -1.77
CCDC38-204ENST00000546816 CORO1AP31146 461 aaKnown RBP4.02□□□□□ -1.77
CCDC38-204ENST00000546816 FMO5P49326 533 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 PITX1P78337 314 aaPredicted RBP4.02□□□□□ -1.77
CCDC38-204ENST00000546816 PPP2R5BQ15173 497 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 SLC45A4Q5BKX6 768 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 LCTLQ6UWM7 567 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 RNF113BQ8IZP6 322 aaKnown RBP4.02□□□□□ -1.77
CCDC38-204ENST00000546816 DMBX1Q8NFW5 382 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 ZNF501Q96CX3 271 aaPredicted RBP4.02□□□□□ -1.77
CCDC38-204ENST00000546816 ZBTB10Q96DT7 871 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 PCYT2Q99447 389 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 HERPUD2Q9BSE4 406 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 RBM4Q9BWF3 364 aaKnown RBP4.02□□□□□ -1.77
CCDC38-204ENST00000546816 PPP1R3EQ9H7J1 279 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 GPR108Q9NPR9 543 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 TAAR2Q9P1P5 351 aa4.02□□□□□ -1.77
CCDC38-204ENST00000546816 EIF3FO00303 357 aaPredicted RBP4.01□□□□□ -1.77
CCDC38-204ENST00000546816 USP8P40818 1118 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 UFM1P61960 85 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 GPATCH4Q5T3I0 446 aaKnown RBP4.01□□□□□ -1.77
CCDC38-204ENST00000546816 STXBP5Q5T5C0 1151 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 TRNP1Q6NT89 227 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 SLC24A4Q8NFF2 622 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 CMKLR1Q99788 373 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 SH3GL2Q99962 352 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 FAM110AQ9BQ89 295 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 FUZQ9BT04 418 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 NDST4Q9H3R1 872 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 HINT3Q9NQE9 182 aaKnown RBP4.01□□□□□ -1.77
CCDC38-204ENST00000546816 AMDHD2Q9Y303 409 aa4.01□□□□□ -1.77
CCDC38-204ENST00000546816 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 SEC14L5O43304 696 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 FTCDO95954 541 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 RNF224P0DH78 156 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 RRM1P23921 792 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 BDKRB2P30411 391 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 PDE1BQ01064 536 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 METTL2BQ6P1Q9 378 aaKnown RBP4□□□□□ -1.77
CCDC38-204ENST00000546816 KCTD18Q6PI47 426 aaPredicted RBP4□□□□□ -1.77
CCDC38-204ENST00000546816 QSOX2Q6ZRP7 698 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 LRRTM4Q86VH4 590 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 METTL27Q8N6F8 245 aaPredicted RBP4□□□□□ -1.77
CCDC38-204ENST00000546816 ZCCHC10Q8TBK6 192 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 PABPC5Q96DU9 382 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms