RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 FZD10Q9ULW2 581 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 USP18Q9UMW8 372 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 NDRG2Q9UN36 371 aaKnown RBP5.2□□□□□ -1.58
CLIP1-217ENST00000543205 TFR2Q9UP52 801 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 EMC9Q9Y3B6 208 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF451Q9Y4E5 1061 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 SNX10Q9Y5X0 201 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 HELZP42694 1942 aaKnown RBP5.2□□□□□ -1.58
CLIP1-217ENST00000543205 SPTBN4Q9H254 2564 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 MYO10Q9HD67 2058 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TBC1D3BA6NDS4 549 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 BTNL10A8MVZ5 291 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 E9PAM4 449 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 GSC2O15499 205 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 FFAR2O15552 330 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CACNG3O60359 315 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TULP3O75386 442 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 LRCH4O75427 683 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 KCNH1O95259 989 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 IGLV1-40P01703 118 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CCDC175P0C221 793 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 DRD1P21728 446 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 HOXD9P28356 352 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 OPRD1P41143 372 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SLC1A1P43005 524 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TNNT3P45378 269 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SEPHS1P49903 392 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 RPS24P62847 133 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CCZ1BP86790 482 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CCZ1P86791 482 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SRSF2Q01130 221 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SCAPQ12770 1279 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF177Q13360 481 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CDH18Q13634 790 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 IFI16Q16666 785 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PFKFB4Q16877 469 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 GAB4Q2WGN9 574 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 UAP1L1Q3KQV9 507 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 BOLA3Q53S33 107 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SLC35F1Q5T1Q4 408 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 DAB2IPQ5VWQ8 1189 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 RWDD4Q6NW29 188 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 MTDHQ86UE4 582 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ANKRD13BQ86YJ7 626 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PLD6Q8N2A8 252 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ARFGAP1Q8N6T3 406 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF557Q8N988 423 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CCDC26Q8TAB7 109 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 HSPH1Q92598 858 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 HTRA1Q92743 480 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 IGSF8Q969P0 613 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PDLIM2Q96JY6 352 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PRICKLE1Q96MT3 831 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SLC2A11Q9BYW1 496 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TSGA10Q9BZW7 698 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 GHITMQ9H3K2 345 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ZWILCHQ9H900 591 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 LTB4R2Q9NPC1 389 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 IRAK4Q9NWZ3 460 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 NSMCE4AQ9NXX6 385 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 REXO2Q9Y3B8 237 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SIT1Q9Y3P8 196 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PCDHGB5Q9Y5G0 923 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SNX13Q9Y5W8 968 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ZFHX2Q9C0A1 2572 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CACNA1HO95180 2353 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 C5orf42Q9H799 3197 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 A0A087X0M5 115 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 C17orf113A0A1B0GUU1 675 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 A0A1B0GVM2 712 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 A0A1B0GX30 115 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 MACROD2A1Z1Q3 448 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TCAF2A6NFQ2 919 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CAPN8A6NHC0 703 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 DRGXA6NNA5 263 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 H0Y3Z8 333 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 I6L893 689 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TRIM38O00635 465 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SHOXO15266 292 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PJA2O43164 708 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 DAPK3O43293 454 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 BUB1O43683 1085 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 KRT86O43790 486 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SPOPO43791 374 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CLDN11O75508 207 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 LUC7L3O95232 432 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 KAT7O95251 611 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PDGFBP01127 241 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 KRT7P08729 469 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CISD3P0C7P0 127 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 GRK2P25098 689 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 GJC1P36383 396 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TNFRSF4P43489 277 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 HSPA7P48741 367 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 HADHBP55084 474 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CDH4P55283 916 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 OXCT1P55809 520 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TPI1P60174 286 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 OCRLQ01968 901 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms