RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	FAM184A	Q8NB25	1140 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	OR52K2	Q8NGK3	314 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	LRTOMT	Q8WZ04	291 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	SGF29	Q96ES7	293 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	BICD1	Q96G01	975 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	CFAP36	Q96G28	342 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	MAEL	Q96JY0	434 aa	Known RBP	5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	COG8	Q96MW5	612 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	TMEM237	Q96Q45	408 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	CCNL2	Q96S94	520 aa	Predicted RBP	5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	SLC38A3	Q99624	504 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	BTBD2	Q9BX70	525 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	GCOM2	Q9BZD3	368 aa	Predicted RBP	5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	TMEM245	Q9H330	911 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	ECT2	Q9H8V3	914 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	VPS37B	Q9H9H4	285 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	LIN28A	Q9H9Z2	209 aa	Known RBP	5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	ZNF304	Q9HCX3	659 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	SLC39A2	Q9NP94	309 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	TCF7L2	Q9NQB0	619 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	ARHGAP20	Q9P2F6	1191 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	ANAPC2	Q9UJX6	822 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	PADI4	Q9UM07	663 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	RNF114	Q9Y508	228 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	CYP46A1	Q9Y6A2	500 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	CMYA5	Q8N3K9	4069 aa		5.27	□□□□□ -1.57
PABPC1-223	ENST00000523636	PRRC2A	P48634	2157 aa	Known RBP	5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	POLE	Q07864	2286 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636		A0A1W2PQF6	199 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	CDRT15L2	A8MXV6	281 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636		I3L4J1	428 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	ACKR2	O00590	384 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	PRRG1	O14668	218 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	PTGES	O14684	152 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	MAGEB2	O15479	319 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	KDM1A	O60341	852 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	RTN2	O75298	545 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	PTP4A3	O75365	173 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	FAM155B	O75949	473 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	RTN3	O95197	1032 aa	Predicted RBP	5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	TSPAN15	O95858	294 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	MT-CO3	P00414	261 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	LDLR	P01130	860 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	GNS	P15586	552 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	GNAT2	P19087	354 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	SFPQ	P23246	707 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	THBS2	P35442	1172 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	MSH2	P43246	934 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	HSPA7	P48741	367 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	CSNK1E	P49674	416 aa	Known RBP	5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	ITGA8	P53708	1063 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	AP2B1	P63010	937 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	ST3GAL1	Q11201	340 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	PTPA	Q15257	358 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	CNN3	Q15417	329 aa	Known RBP	5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	STIL	Q15468	1287 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	MAJIN	Q3KP22	176 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	ZACN	Q401N2	412 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	ASPRV1	Q53RT3	343 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	CAVIN1	Q6NZI2	390 aa	Known RBP	5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	NPNT	Q6UXI9	565 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	ESPNL	Q6ZVH7	1005 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	B4GALNT4	Q76KP1	1039 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	FAM129C	Q86XR2	697 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	LIX1L	Q8IVB5	337 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	UNC45B	Q8IWX7	931 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	CREB3L4	Q8TEY5	395 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	PDCD6IP	Q8WUM4	868 aa	Known RBP	5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	C17orf50	Q8WW18	174 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	SHC3	Q92529	594 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	JADE3	Q92613	823 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	LURAP1	Q96LR2	239 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	ZNF512	Q96ME7	567 aa	Predicted RBP	5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	MMS19	Q96T76	1030 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	SLC39A3	Q9BRY0	314 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	CNPPD1	Q9BV87	410 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	ACAT2	Q9BWD1	397 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	SLC46A2	Q9BY10	475 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	NAPB	Q9H115	298 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	NXF3	Q9H4D5	531 aa	Known RBP	5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	POLR1B	Q9H9Y6	1135 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	ZNF302	Q9NR11	478 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	RPS6KA6	Q9UK32	745 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	PCDHGB4	Q9UN71	923 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	SIK3	Q9Y2K2	1263 aa		5.26	□□□□□ -1.57
PABPC1-223	ENST00000523636	IGKV6-21	A0A0C4DH24	114 aa		5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	TCAF2	A6NFQ2	919 aa		5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	AP3B1	O00203	1094 aa		5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	CACNB4	O00305	520 aa	Predicted RBP	5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	DDX3X	O00571	662 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	BCAT2	O15382	392 aa	Predicted RBP	5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	TXNL1	O43396	289 aa		5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	USP12	O75317	370 aa		5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	MTRF1	O75570	445 aa	Known RBP	5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	PALM	O75781	387 aa		5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	LDOC1	O95751	146 aa	Predicted RBP	5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	DDAH2	O95865	285 aa		5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	CYP2A6	P11509	494 aa	Predicted RBP	5.25	□□□□□ -1.57
PABPC1-223	ENST00000523636	TSHR	P16473	764 aa		5.25	□□□□□ -1.57

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