RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 ZNF34Q8IZ26 560 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZBTB2Q8N680 514 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 OR10V1Q8NGI7 309 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 FAM76AQ8TAV0 307 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TAS1R2Q8TE23 839 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZNF501Q96CX3 271 aaPredicted RBP2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ALG14Q96F25 216 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SYT17Q9BSW7 474 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 C1QTNF5Q9BXJ0 243 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 DDX4Q9NQI0 724 aaKnown RBP2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CNOT7Q9UIV1 285 aaKnown RBP2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ERVK-11Q9UQG0 969 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 LSM4Q9Y4Z0 139 aaKnown RBP2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SMCHD1A6NHR9 2005 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SNED1Q8TER0 1413 aa2.76□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TTC36A6NLP5 189 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 PCDH7O60245 1069 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TUBBP07437 444 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ITGA2P17301 1181 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 MAOAP21397 527 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 MMP14P50281 582 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 NR0B1P51843 470 aaKnown RBP2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 DRG2P55039 364 aaKnown RBP2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TUBB4BP68371 445 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SORDQ00796 357 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 FCN2Q15485 313 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 EIF2S3LQ2VIR3 472 aaKnown RBP2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZNF876PQ49A33 203 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TMEM35AQ53FP2 167 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SGO1Q5FBB7 561 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SLC35E4Q6ICL7 350 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TTI2Q6NXR4 508 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ANKRD54Q6NXT1 300 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TMEM81Q6P7N7 255 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SLC22A25Q6T423 547 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CEACAM20Q6UY09 585 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 LRRC8DQ7L1W4 858 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TDRPQ86YL5 185 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 FOXRED2Q8IWF2 684 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 C1orf87Q8N0U7 546 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SPATA6LQ8N4H0 392 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 LSM14AQ8ND56 463 aaKnown RBP2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CADM4Q8NFZ8 388 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 DUSP19Q8WTR2 217 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TBC1D20Q96BZ9 403 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CMKLR1Q99788 373 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 NEURL2Q9BR09 285 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 H2AFJQ9BTM1 129 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 POLR3CQ9BUI4 534 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 INTS2Q9H0H0 1204 aaKnown RBP2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ESRP2Q9H6T0 727 aaKnown RBP2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ITM2CQ9NQX7 267 aa2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 BEX4Q9NWD9 120 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1088P-201ENST00000516850 IGKV3D-20A0A0C4DH25 116 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 A0A1B0GU03 582 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CCDC194A0A1B0GVG4 234 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TACC1O75410 805 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TFP02787 698 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 HEXAP06865 529 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 INHBAP08476 426 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CYC1P08574 325 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZNF883P0CG24 379 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 KRT5P13647 590 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 MYOD1P15172 320 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 PAX1P15863 534 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 EDN2P20800 178 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ALDH4A1P30038 563 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 PSMC2P35998 433 aaKnown RBP2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 GABRB2P47870 512 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 AMPHP49418 695 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 FOXM1Q08050 763 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 GAGE5Q13069 117 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 GAGE6Q13070 117 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 PPIGQ13427 754 aaKnown RBP eCLIP2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CCDC96Q2M329 555 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZNF667Q5HYK9 610 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SIRPB2Q5JXA9 342 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SFMBT2Q5VUG0 894 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ATG16L1Q676U5 607 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 FBXO46Q6PJ61 603 aaPredicted RBP2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 LCTLQ6UWM7 567 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 NOL8Q76FK4 1167 aaKnown RBP2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SLC35F3Q8IY50 421 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 HUS1BQ8NHY5 278 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 PIGTQ969N2 578 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 LGALS12Q96DT0 336 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 STAMBPL1Q96FJ0 436 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZNF354BQ96LW1 612 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 QRFPRQ96P65 431 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 GFRA4Q9GZZ7 299 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 PPP1R3EQ9H7J1 279 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 HINT3Q9NQE9 182 aaKnown RBP2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 HCN3Q9P1Z3 774 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 OR2W1Q9Y3N9 320 aa2.74□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TEX13CA0A0J9YWL9 993 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 GAGE10A6NGK3 116 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZNHIT1O43257 154 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SEC14L5O43304 696 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 URODP06132 367 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 IFIT1P09914 478 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms