RNA–Protein interactions for RNA: ENST00000500085.2

FAT1-202, Transcript of FAT atypical cadherin 1, humanhuman

TSL 2

Gene FAT1, Length 2,224 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAT1-202ENST00000500085 PCDHGC4Q9Y5F7 938 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 MICAL3Q7RTP6 2002 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 TANC1Q9C0D5 1861 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 ANKRD36A6QL64 1941 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 CCDC189A1A4V9 331 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 H3BMM5 538 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 CFLARO15519 480 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 ABLIM3O94929 683 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 THOP1P52888 689 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 CDH13P55290 713 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 DSG1Q02413 1049 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 ART3Q13508 389 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 TAF1AQ15573 450 aaPredicted RBP12.89□□□□□ -0.35
FAT1-202ENST00000500085 OR4D1Q15615 310 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 TAF12Q16514 161 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 PIGGQ5H8A4 983 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 RNF219Q5W0B1 726 aaPredicted RBP12.89□□□□□ -0.35
FAT1-202ENST00000500085 CXorf57Q6NSI4 855 aaKnown RBP12.89□□□□□ -0.35
FAT1-202ENST00000500085 GK5Q6ZS86 529 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 KBTBD6Q86V97 674 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 PTGR2Q8N8N7 351 aaPredicted RBP12.89□□□□□ -0.35
FAT1-202ENST00000500085 LPCAT1Q8NF37 534 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 ZNF296Q8WUU4 475 aaPredicted RBP12.89□□□□□ -0.35
FAT1-202ENST00000500085 MIEF2Q96C03 454 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 MYRFLQ96LU7 910 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 ZBED2Q9BTP6 218 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 WDR41Q9HAD4 459 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 INTS10Q9NVR2 710 aaKnown RBP12.89□□□□□ -0.35
FAT1-202ENST00000500085 ADAMTS6Q9UKP5 1117 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 FAM50BQ9Y247 325 aa12.89□□□□□ -0.35
FAT1-202ENST00000500085 C2orf81A6NN90 581 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 UBXN8O00124 270 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 SCAMP3O14828 347 aaKnown RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 UBDO15205 165 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 SIX3O95343 332 aaPredicted RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 F11P03951 625 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 RAG1P15918 1043 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 FMO4P31512 558 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 DPP6P42658 865 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 ALDH1A3P47895 512 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 INHBCP55103 352 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 PKNOX1P55347 436 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 ARF5P84085 180 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 CDC16Q13042 620 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 ZNF423Q2M1K9 1284 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 IRGCQ6NXR0 463 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 AFTPHQ6ULP2 937 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 LINGO4Q6UY18 593 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 CYHR1Q6ZMK1 362 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 HMGCLL1Q8TB92 370 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 LPGAT1Q92604 370 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 USP13Q92995 863 aaPredicted RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 ECSITQ9BQ95 431 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 KLF16Q9BXK1 252 aaPredicted RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 SMPD4Q9NXE4 827 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 VPS28Q9UK41 221 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 MED16Q9Y2X0 877 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 YIPF1Q9Y548 306 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 RAI2Q9Y5P3 530 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 ANAPC1Q9H1A4 1944 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 H3BNX3 289 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 STX16-NPEPL1H3BU86 382 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 SNAP91O60641 907 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 FKTNO75072 461 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 RHOBTB1O94844 696 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 MT-CO1P00395 513 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 C1RP00736 705 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 MTHFD2P13995 350 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 MSX2P35548 267 aaPredicted RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 CDKN1CP49918 316 aaPredicted RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 MRPS35P82673 323 aaKnown RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 CEACAM7Q14002 265 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 LRRC36Q1X8D7 754 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 SETMARQ53H47 684 aaPredicted RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 FAM43BQ6ZT52 329 aaPredicted RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 RNF148Q8N7C7 305 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 RHEBL1Q8TAI7 183 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 TMA16Q96EY4 203 aaKnown RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 DEFB118Q96PH6 123 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 ATOH8Q96SQ7 321 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 TRPC7Q9HCX4 862 aa12.88□□□□□ -0.35
FAT1-202ENST00000500085 GEMIN8Q9NWZ8 242 aaKnown RBP12.88□□□□□ -0.35
FAT1-202ENST00000500085 GBF1Q92538 1859 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 ATP6AP2A0A1C7CYW4 349 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 LRRC14BA6NHZ5 514 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 PPP6CO00743 305 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 ATP6AP2O75787 350 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 SRP72O76094 671 aaKnown RBP12.87□□□□□ -0.35
FAT1-202ENST00000500085 CD160O95971 181 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 XRCC1P18887 633 aaPredicted RBP12.87□□□□□ -0.35
FAT1-202ENST00000500085 SH3BP2P78314 561 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 SQLEQ14534 574 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 PFKFB4Q16877 469 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 LPCAT4Q643R3 524 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 PAQR3Q6TCH7 311 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 CYP2S1Q96SQ9 504 aa12.87□□□□□ -0.35
FAT1-202ENST00000500085 TFB2MQ9H5Q4 396 aaKnown RBP12.87□□□□□ -0.35
FAT1-202ENST00000500085 TAS2R13Q9NYV9 303 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms