RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 DFNA5O60443 496 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ABCB7O75027 752 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ENTPD3O75355 529 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CDK1P06493 297 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 NR3C2P08235 984 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CCNYL3P0C7X3 344 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 HNRNPCL4P0DMR1 293 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 MBL2P11226 248 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CALML3P27482 149 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ERP29P30040 261 aaKnown RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ADSSP30520 456 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 JAM2P57087 298 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 BPIFB3P59826 476 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 TEKQ02763 1124 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 SPIRE1Q08AE8 756 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 MGAT3Q09327 533 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ORC2Q13416 577 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ACOX1Q15067 660 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 POU4F3Q15319 338 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 GRIK4Q16099 956 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 SWI5Q1ZZU3 235 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF181Q2M3W8 571 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ERICH5Q6P6B1 374 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 TMEM81Q6P7N7 255 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF773Q6PK81 442 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 KIAA1324Q6UXG2 1013 aaKnown RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 KRT73Q86Y46 540 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 METTL4Q8N3J2 472 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 TRPV3Q8NET8 790 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 NDNFQ8TB73 568 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 NELL1Q92832 810 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CSF3RQ99062 836 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 GMLQ99445 158 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 HDHD5Q9BXW7 423 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 RACGAP1Q9H0H5 632 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 OR51B5Q9H339 312 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 KCNH7Q9NS40 1196 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 RDH8Q9NYR8 311 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 GPRC5BQ9NZH0 403 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CDY2AQ9Y6F7 541 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 E2F8A0AVK6 867 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 FABP1P07148 127 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 SELLP14151 372 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 PCSK2P16519 638 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 RAB3AP20336 220 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 GLDCP23378 1020 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 IVDP26440 423 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 PSMB9P28065 219 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 HOXC13P31276 330 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 AIF1P55008 147 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 HADHBP55084 474 aaKnown RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 TRAF3Q13114 568 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CEACAM7Q14002 265 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 DOK7Q18PE1 504 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 EFHC2Q5JST6 749 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 TBCELQ5QJ74 424 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 CCNYL2Q5T2Q4 361 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 DEFB132Q7Z7B7 95 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 SLC9A9Q8IVB4 645 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 BLIDQ8IZY5 108 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 MFSD4AQ8N468 514 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 PCDH20Q8N6Y1 951 aaKnown RBP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 ATG16L2Q8NAA4 619 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 C3orf58Q8NDZ4 430 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 RHOXF1Q8NHV9 184 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 PPP1R13LQ8WUF5 828 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 GPKOWQ92917 476 aaPredicted RBP eCLIP6.86□□□□□ -1.31
VPS13B-205ENST00000493587 SLC47A1Q96FL8 570 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 FAM167AQ96KS9 214 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 TMEM47Q9BQJ4 181 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 C9orf16Q9BUW7 83 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 SYNDIG1Q9H7V2 258 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 PNPOQ9NVS9 261 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 EHD3Q9NZN3 535 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 SIRPGQ9P1W8 387 aa6.86□□□□□ -1.31
VPS13B-205ENST00000493587 TLR3O15455 904 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 WEE2P0C1S8 567 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 RALAP11233 206 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 APEHP13798 732 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 TFE3P19532 575 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 MYF6P23409 242 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ELK4P28324 431 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 DDOSTP39656 456 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 EIF2DP41214 584 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 JAG1P78504 1218 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PIGFQ07326 219 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 BMPR2Q13873 1038 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 HSF5Q4G112 596 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 KLHL12Q53G59 568 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 RTP2Q5QGT7 225 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 HES5Q5TA89 166 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 NXNL2Q5VZ03 156 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 C11orf63Q6NUN7 778 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 CDC42EP5Q6NZY7 148 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 LIPIQ6XZB0 460 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 CATSPER4Q7RTX7 472 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 LINC00523Q86TU6 105 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF276Q8N554 614 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ATAD1Q8NBU5 361 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms