RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 GPT2Q8TD30 523 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 CENPIQ92674 756 aaPredicted RBP11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 EXOC2Q96KP1 924 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 TMUB1Q9BVT8 246 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 NAA15Q9BXJ9 866 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 SPRY4Q9C004 299 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 RDH14Q9HBH5 336 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 POLHQ9Y253 713 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 RTTNQ86VV8 2226 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 ANKRD36A6QL64 1941 aa11.72□□□□□ -0.53
CACNA1C-228ENST00000492150 RASA4BC9J798 803 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 TNFRSF10CO14798 259 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 RASA4O43374 803 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 CPNE6O95741 557 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 HOXC4P09017 264 aaPredicted RBP11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 GM2AP17900 193 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 SDC4P31431 198 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 PTPN9P43378 593 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 OR1D5P58170 312 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 NR6A1Q15406 480 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 MAN2A1Q16706 1144 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 CLPPQ16740 277 aaPredicted RBP11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 AMZ1Q400G9 498 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 ATP1A1-AS1Q5TC04 95 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 KLHDC7AQ5VTJ3 777 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 C16orf46Q6P387 395 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 STRADAQ7RTN6 431 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 PIM3Q86V86 326 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 C17orf82Q86X59 251 aaPredicted RBP11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 RTL3Q8N8U3 475 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 Q8NA96 180 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 MSANTD4Q8NCY6 345 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 RCBTB1Q8NDN9 531 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 NTAN1Q96AB6 310 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 NCAPGQ9BPX3 1015 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 NUDT22Q9BRQ3 303 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 DPEP2Q9H4A9 486 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 MLXIPLQ9NP71 852 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 SPATS2LQ9NUQ6 558 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 ATP8A1Q9Y2Q0 1164 aa11.71□□□□□ -0.53
CACNA1C-228ENST00000492150 CSPG4Q6UVK1 2322 aa11.71□□□□□ -0.54
CACNA1C-228ENST00000492150 FN1P02751 2386 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 IGHV5-10-1A0A0J9YXX1 117 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 FAM221AA4D161 298 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 CFAP69A5D8W1 941 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 CACNB4O00305 520 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 GADD45BO75293 160 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 RECQL5O94762 991 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 MMP8P22894 467 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 CD1CP29017 333 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 TRIM23P36406 574 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 MAZP56270 477 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 YBEYP58557 167 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 RAB15P59190 212 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 SRSF11Q05519 484 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 RALGDSQ12967 914 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 MAP9Q49MG5 647 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 MIIPQ5JXC2 388 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 PAPD7Q5XG87 772 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 ERAP2Q6P179 960 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 BRAT1Q6PJG6 821 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 LIPIQ6XZB0 460 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 ZNF438Q7Z4V0 828 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 DNAAF5Q86Y56 855 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 NRROSQ86YC3 692 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 CAMK1DQ8IU85 385 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 PELI3Q8N2H9 469 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 EPS8L1Q8TE68 723 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 FAM172AQ8WUF8 416 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 SLC20A1Q8WUM9 679 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 ZNF641Q96N77 438 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 TEFMQ96QE5 360 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 LGR4Q9BXB1 951 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 MFRPQ9BY79 579 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 TRIT1Q9H3H1 467 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 NDST4Q9H3R1 872 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 NOCTQ9UK39 431 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 PCDHB3Q9Y5E6 796 aa11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 PCDHGA9Q9Y5G4 932 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 OAS3Q9Y6K5 1087 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-228ENST00000492150 NBEAL1Q6ZS30 2694 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 ANKUB1A6NFN9 424 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 WASH4PA8MWX3 477 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 LRCH4O75427 683 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 FUCA1P04066 466 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 CYP1A1P04798 512 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 FGF1P05230 155 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 CD99P14209 185 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 CHRNB2P17787 502 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 KELP23276 732 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 EPHB2P29323 1055 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 ALDH4A1P30038 563 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 RGRP47804 291 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 TRA2AQ13595 282 aaKnown RBP eCLIP11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 GRM3Q14832 879 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 NR1D2Q14995 579 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 PARP15Q460N3 678 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 VWA3BQ502W6 1294 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 CDH24Q86UP0 819 aa11.69□□□□□ -0.54
CACNA1C-228ENST00000492150 UMODL1-AS1Q8N2C9 162 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms