RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PRORYQ9H606 182 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 SAP30LQ9HAJ7 183 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 TRPV5Q9NQA5 729 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 TBC1D13Q9NVG8 400 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 ARL8BQ9NVJ2 186 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 DNAJB4Q9UDY4 337 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 VPS4AQ9UN37 437 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 EXOC6BQ9Y2D4 811 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 PIAS3Q9Y6X2 628 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 BOD1L1Q8NFC6 3051 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 RHPN2P1A8MT19 583 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 KCNAB3O43448 404 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 RANBP6O60518 1105 aaKnown RBP5□□□□□ -1.61
BRCA1-217ENST00000487825 WDR47O94967 919 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 GOLGA8HP0CJ92 632 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 TMIGD3P0DMS9 266 aaPredicted RBP5□□□□□ -1.61
BRCA1-217ENST00000487825 TRIM27P14373 513 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 RPL17P18621 184 aaKnown RBP5□□□□□ -1.61
BRCA1-217ENST00000487825 FCARP24071 287 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 ATICP31939 592 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 CPA2P48052 419 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 GLUD2P49448 558 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 FOXG1P55316 489 aaPredicted RBP5□□□□□ -1.61
BRCA1-217ENST00000487825 RPS13P62277 151 aaKnown RBP5□□□□□ -1.61
BRCA1-217ENST00000487825 SEMA3BQ13214 749 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 STIM1Q13586 685 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 PDXDC1Q6P996 788 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 C1orf228Q6PIY5 440 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 ADGRF4Q8IZF3 695 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 CLASRPQ8N2M8 674 aaKnown RBP5□□□□□ -1.61
BRCA1-217ENST00000487825 MBD3L2Q8NHZ7 208 aaPredicted RBP5□□□□□ -1.61
BRCA1-217ENST00000487825 ADAMTS14Q8WXS8 1223 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 IQCDQ96DY2 449 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 MSANTD3Q96H12 275 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 MBOAT7Q96N66 472 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 PCYT2Q99447 389 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 NACAP1Q9BZK3 213 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 UNKQ9C0B0 810 aaKnown RBP5□□□□□ -1.61
BRCA1-217ENST00000487825 NUAK2Q9H093 628 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 BTBD1Q9H0C5 482 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 NAPBQ9H115 298 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 PNPLA8Q9NP80 782 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 HEYLQ9NQ87 328 aaPredicted RBP5□□□□□ -1.61
BRCA1-217ENST00000487825 TCP11L1Q9NUJ3 509 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 HEY2Q9UBP5 337 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 ZMYM2Q9UBW7 1377 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 NOTCH2Q04721 2471 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 GON4LQ3T8J9 2241 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 BSNQ9UPA5 3926 aa5□□□□□ -1.61
BRCA1-217ENST00000487825 MYLKQ15746 1914 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 AHCTF1Q8WYP5 2266 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 ZNF638Q14966 1978 aaKnown RBP4.99□□□□□ -1.61
BRCA1-217ENST00000487825 CCDC194A0A1B0GVG4 234 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 ENO4A6NNW6 628 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 RRHO14718 337 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 THAP12O43422 761 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 RHOBTB1O94844 696 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 IL18RAPO95256 599 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 MBPP02686 304 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-217ENST00000487825 HNRNPA1P09651 372 aaKnown RBP eCLIP4.99□□□□□ -1.61
BRCA1-217ENST00000487825 IFIT2P09913 472 aaKnown RBP4.99□□□□□ -1.61
BRCA1-217ENST00000487825 CCNE1P24864 410 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 HOXA9P31269 272 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 THBS4P35443 961 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 PBX1P40424 430 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 CCR10P46092 362 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 JAK3P52333 1124 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 LINC00205P59089 165 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 RAE1P78406 368 aaKnown RBP4.99□□□□□ -1.61
BRCA1-217ENST00000487825 KARSQ15046 597 aaKnown RBP4.99□□□□□ -1.61
BRCA1-217ENST00000487825 ELF2Q15723 593 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 DGKKQ5KSL6 1271 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 KLHDC7AQ5VTJ3 777 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 TANGO2Q6ICL3 276 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 PALB2Q86YC2 1186 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 ZNF548Q8NEK5 533 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-217ENST00000487825 SUN3Q8TAQ9 357 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 LRRC46Q96FV0 321 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 TTC14Q96N46 770 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 TMEM175Q9BSA9 504 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 TM2D2Q9BX73 214 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 EBF3Q9H4W6 596 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 JMJD4Q9H9V9 463 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 ZNF334Q9HCZ1 680 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-217ENST00000487825 POT1Q9NUX5 634 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 MARCH5Q9NX47 278 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 GDE1Q9NZC3 331 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 ANAPC4Q9UJX5 808 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 FBXW11Q9UKB1 542 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 PCDHB2Q9Y5E7 798 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 LRRK2Q5S007 2527 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 COL1A2P08123 1366 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 DENND4CQ5VZ89 1909 aa4.99□□□□□ -1.61
BRCA1-217ENST00000487825 A0A087WZ62 844 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 EXTL3O43909 919 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 ATP9AO75110 1047 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 DDHD2O94830 711 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 POLR2MP0CAP2 368 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 SCP2P22307 547 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 PIK3CBP42338 1070 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms