RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 RNF113BQ8IZP6 322 aaKnown RBP3.7□□□□□ -1.82
RBM39-228ENST00000471635 SPATA5Q8NB90 893 aa3.7□□□□□ -1.82
RBM39-228ENST00000471635 C11orf65Q8NCR3 313 aa3.7□□□□□ -1.82
RBM39-228ENST00000471635 GFRA4Q9GZZ7 299 aa3.7□□□□□ -1.82
RBM39-228ENST00000471635 NDST4Q9H3R1 872 aa3.7□□□□□ -1.82
RBM39-228ENST00000471635 C20orf141Q9NUB4 165 aa3.7□□□□□ -1.82
RBM39-228ENST00000471635 HSF4Q9ULV5 492 aa3.7□□□□□ -1.82
RBM39-228ENST00000471635 FAF1Q9UNN5 650 aaPredicted RBP3.7□□□□□ -1.82
RBM39-228ENST00000471635 PCDHGB3Q9Y5G1 929 aa3.7□□□□□ -1.82
RBM39-228ENST00000471635 CACNA1FO60840 1977 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 GOLGA6L10A0A0M3HER8 536 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 IFNL4K9M1U5 179 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 TBX6O95947 436 aaPredicted RBP3.69□□□□□ -1.82
RBM39-228ENST00000471635 MAOAP21397 527 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 RRM1P23921 792 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 BDKRB2P30411 391 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 PGM1P36871 562 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 TAF6P49848 677 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 CDH15P55291 814 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 PDE1BQ01064 536 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 OS9Q13438 667 aaPredicted RBP3.69□□□□□ -1.82
RBM39-228ENST00000471635 HIST2H2ACQ16777 129 aaPredicted RBP3.69□□□□□ -1.82
RBM39-228ENST00000471635 CCDC96Q2M329 555 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 HIST2H2BDQ6DRA6 164 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 TRNP1Q6NT89 227 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 ZNF852Q6ZMS4 543 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 HUS1BQ8NHY5 278 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 NOC3LQ8WTT2 800 aaKnown RBP3.69□□□□□ -1.82
RBM39-228ENST00000471635 MTERF1Q99551 399 aaKnown RBP3.69□□□□□ -1.82
RBM39-228ENST00000471635 LBHD1Q9BQE6 289 aaPredicted RBP3.69□□□□□ -1.82
RBM39-228ENST00000471635 EGLN1Q9GZT9 426 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 PPP1R3EQ9H7J1 279 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 HSPB7Q9UBY9 170 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 TTC7AQ9ULT0 858 aaPredicted RBP3.69□□□□□ -1.82
RBM39-228ENST00000471635 OR2W1Q9Y3N9 320 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 LOXL2Q9Y4K0 774 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 MMP24Q9Y5R2 645 aa3.69□□□□□ -1.82
RBM39-228ENST00000471635 GOLGA6L9A6NEM1 432 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 ERI2A8K979 691 aaKnown RBP3.68□□□□□ -1.82
RBM39-228ENST00000471635 PMS2P5A8MQ11 134 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 TFP02787 698 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 METAP2P50579 478 aaKnown RBP eCLIP3.68□□□□□ -1.82
RBM39-228ENST00000471635 NR0B1P51843 470 aaKnown RBP3.68□□□□□ -1.82
RBM39-228ENST00000471635 RAD23BP54727 409 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 SORDQ00796 357 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 UBE3AQ05086 875 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 FCN2Q15485 313 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 ZNF766Q5HY98 468 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 PDSS1Q5T2R2 415 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 ARHGAP11AQ6P4F7 1023 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 BBS12Q6ZW61 710 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 SPATA6LQ8N4H0 392 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 NKAPQ8N5F7 415 aaKnown RBP3.68□□□□□ -1.82
RBM39-228ENST00000471635 ZNF485Q8NCK3 441 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 TAS1R2Q8TE23 839 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 TAF15Q92804 592 aaKnown RBP eCLIP3.68□□□□□ -1.82
RBM39-228ENST00000471635 PCYT2Q99447 389 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 SYT17Q9BSW7 474 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 LRRC1Q9BTT6 524 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 RBM4Q9BWF3 364 aaKnown RBP3.68□□□□□ -1.82
RBM39-228ENST00000471635 INTS2Q9H0H0 1204 aaKnown RBP3.68□□□□□ -1.82
RBM39-228ENST00000471635 TKTL2Q9H0I9 626 aa3.68□□□□□ -1.82
RBM39-228ENST00000471635 CNOT7Q9UIV1 285 aaKnown RBP3.68□□□□□ -1.82
RBM39-228ENST00000471635 WDR1O75083 606 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 TCEA3O75764 348 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 ZNF883P0CG24 379 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 DDX5P17844 614 aaKnown RBP3.67□□□□□ -1.82
RBM39-228ENST00000471635 ALDH4A1P30038 563 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 RNPS1Q15287 305 aaKnown RBP3.67□□□□□ -1.82
RBM39-228ENST00000471635 KRT24Q2M2I5 525 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 TMEM30BQ3MIR4 351 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 SIRPB2Q5JXA9 342 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 TXNDC8Q6A555 127 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 METTL2BQ6P1Q9 378 aaKnown RBP3.67□□□□□ -1.82
RBM39-228ENST00000471635 CNBD1Q8NA66 436 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 FAM76AQ8TAV0 307 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 METTL2AQ96IZ6 378 aaKnown RBP3.67□□□□□ -1.82
RBM39-228ENST00000471635 F2RL3Q96RI0 385 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 POLR3CQ9BUI4 534 aaPredicted RBP3.67□□□□□ -1.82
RBM39-228ENST00000471635 BARHL1Q9BZE3 327 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 MMP25Q9NPA2 562 aa3.67□□□□□ -1.82
RBM39-228ENST00000471635 HINT3Q9NQE9 182 aaKnown RBP3.67□□□□□ -1.82
RBM39-228ENST00000471635 BEX4Q9NWD9 120 aaPredicted RBP3.67□□□□□ -1.82
RBM39-228ENST00000471635 TEX13CA0A0J9YWL9 993 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 A0A1B0GU03 582 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 GUCY1B2O75343 617 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 LDHAP00338 332 aaKnown RBP3.66□□□□□ -1.82
RBM39-228ENST00000471635 NAE1Q13564 534 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 GTF2H2Q13888 395 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 GTF2H2CQ6P1K8 395 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 DUS1LQ6P1R4 473 aaKnown RBP3.66□□□□□ -1.82
RBM39-228ENST00000471635 QSOX2Q6ZRP7 698 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 ASB18Q6ZVZ8 466 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 LRRC8DQ7L1W4 858 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 RRM2BQ7LG56 351 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 DGLUCYQ7Z3D6 616 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 SPEM1Q8N4L4 309 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 OR10V1Q8NGI7 309 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 TRIM63Q969Q1 353 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 PABPC5Q96DU9 382 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms