RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 PABPC1P11940 636 aaKnown RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 COX6B1P14854 86 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 GCFC2P16383 781 aaKnown RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 GOT1P17174 413 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 KRT15P19012 456 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 PDCP20941 246 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 BDNFP23560 247 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 ACAT1P24752 427 aaKnown RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 PCSK1P29120 753 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 SSTR2P30874 369 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 CXCR5P32302 372 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 UGT1A3P35503 534 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 CHKAP35790 457 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 MAPK10P53779 464 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 RCAN1P53805 252 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 AKAP17AQ02040 695 aaKnown RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 LTBQ06643 244 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 MCL1Q07820 350 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 GOLGA8FQ08AF8 430 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 GOLGA8DPQ0D2H9 430 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 ART3Q13508 389 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 MAPRE1Q15691 268 aaKnown RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 FXNQ16595 210 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 ERCC6LQ2NKX8 1250 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 NADK2Q4G0N4 442 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 FNDC3BQ53EP0 1204 aaKnown RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 SNX30Q5VWJ9 437 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 TMEM215Q68D42 235 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 TBC1D3GQ6DHY5 549 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 TBC1D3CQ6IPX1 549 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 FAM171BQ6P995 826 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 CATSPER3Q86XQ3 398 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 TBC1D3Q8IZP1 549 aaPredicted RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 CACNA2D3Q8IZS8 1091 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 AHI1Q8N157 1196 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 TMEM86AQ8N2M4 240 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 PDCL2Q8N4E4 241 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 OR6B3Q8NGW1 331 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 OR14C36Q8NHC7 312 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 SORCS1Q8WY21 1168 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 PTPRN2Q92932 1015 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 WBP2Q969T9 261 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 FBXW5Q969U6 566 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 KIAA1143Q96AT1 154 aaPredicted RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 CENPTQ96BT3 561 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 SGSM3Q96HU1 749 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 ZBTB45Q96K62 511 aaPredicted RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 C8orf48Q96LL4 319 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 ZNF778Q96MU6 729 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 GBP4Q96PP9 640 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 GFM1Q96RP9 751 aaKnown RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 IL12RB2Q99665 862 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 NAP1L4Q99733 375 aaKnown RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 OMDQ99983 421 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 AARSD1Q9BTE6 412 aaKnown RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 EFHD1Q9BUP0 239 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 SLC2A11Q9BYW1 496 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 NACA2Q9H009 215 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 IL25Q9H293 177 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 GPN2Q9H9Y4 310 aaPredicted RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 CHST11Q9NPF2 352 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 SH3GLB2Q9NR46 395 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 CATSPERZQ9NTU4 200 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 SAE1Q9UBE0 346 aaPredicted RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 SERGEFQ9UGK8 458 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 LSM7Q9UK45 103 aaKnown RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 RCAN3Q9UKA8 241 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 PCDHA12Q9UN75 941 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 DERAQ9Y315 318 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 KLF2Q9Y5W3 355 aaPredicted RBP2.94□□□□□ -1.94
CD46-210ENST00000462968 ANK1P16157 1881 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 MED13Q9UHV7 2174 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 NBEAL1Q6ZS30 2694 aa2.94□□□□□ -1.94
CD46-210ENST00000462968 ARID2Q68CP9 1835 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 LRRK1Q38SD2 2015 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 MYO16Q9Y6X6 1858 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 F8VP50 259 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 GOLGA6L22H0YM25 854 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 GABRDO14764 452 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 CASC3O15234 703 aaKnown RBP2.93□□□□□ -1.94
CD46-210ENST00000462968 MID1O15344 667 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 LRRTM2O43300 516 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 DUX1O43812 170 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 CCNT1O60563 726 aaKnown RBP2.93□□□□□ -1.94
CD46-210ENST00000462968 PPP6R2O75170 966 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 RFPL1O75677 317 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 STC2O76061 302 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 RTN3O95197 1032 aaPredicted RBP2.93□□□□□ -1.94
CD46-210ENST00000462968 CSF2P04141 144 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 ATP5BP06576 529 aaKnown RBP2.93□□□□□ -1.94
CD46-210ENST00000462968 DLDP09622 509 aaKnown RBP2.93□□□□□ -1.94
CD46-210ENST00000462968 PYGMP11217 842 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 HK1P19367 917 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 TCN2P20062 427 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 KLK2P20151 261 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 YWHAQP27348 245 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 OAS2P29728 719 aaKnown RBP2.93□□□□□ -1.94
CD46-210ENST00000462968 SLC8A1P32418 973 aa2.93□□□□□ -1.94
CD46-210ENST00000462968 CSTF2P33240 577 aaKnown RBP eCLIP2.93□□□□□ -1.94
CD46-210ENST00000462968 ETV5P41161 510 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms