RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 REV3LO60673 3130 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 CCDC78A2IDD5 438 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 C2CD4BA6NLJ0 364 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 VSTM5A8MXK1 200 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 HHLA1C9JL84 531 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 H3BUI4 141 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 PGRMC1O00264 195 aaKnown RBP7.56□□□□□ -1.2
UBE4B-204ENST00000462658 PSTPIP1O43586 416 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 TBC1D4O60343 1298 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 RNF8O76064 485 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 TYRP14679 529 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 DESP17661 470 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 LAG3P18627 525 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 GPD1P21695 349 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 CYP2F1P24903 491 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 MARCKSL1P49006 195 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 NDUFV1P49821 464 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 TKTL1P51854 596 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 ARPP19P56211 112 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 TAS2R40P59535 323 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 TUBB4BP68371 445 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 MRPS5P82675 430 aaKnown RBP7.56□□□□□ -1.2
UBE4B-204ENST00000462658 ADIGQ0VDE8 80 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 TAF5Q15542 800 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 HADHQ16836 314 aaKnown RBP7.56□□□□□ -1.2
UBE4B-204ENST00000462658 USP41Q3LFD5 358 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 CCDC14Q49A88 953 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 RAB41Q5JT25 222 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 LRRC38Q5VT99 294 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 DCAF12L1Q5VU92 463 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 DAB2IPQ5VWQ8 1189 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 PSRC1Q6PGN9 363 aaPredicted RBP7.56□□□□□ -1.2
UBE4B-204ENST00000462658 RSRC2Q7L4I2 434 aaKnown RBP7.56□□□□□ -1.2
UBE4B-204ENST00000462658 SLC26A9Q7LBE3 791 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 ARCQ7LC44 396 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 GDF7Q7Z4P5 450 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 SIX6OS1Q8N1H7 587 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 SLC39A11Q8N1S5 342 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 FITM2Q8N6M3 262 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 COLGALT1Q8NBJ5 622 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 SPATA4Q8NEY3 305 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 IL17RDQ8NFM7 739 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 GOLGA1Q92805 767 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 CNPY3Q9BT09 278 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 LRFN3Q9BTN0 628 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 ULBP1Q9BZM6 244 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 ZNF703Q9H7S9 590 aaPredicted RBP7.56□□□□□ -1.2
UBE4B-204ENST00000462658 PNPLA8Q9NP80 782 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 TMEM30AQ9NV96 361 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 PARPBPQ9NWS1 579 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 SPG21Q9NZD8 308 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 TTC7AQ9ULT0 858 aaPredicted RBP7.56□□□□□ -1.2
UBE4B-204ENST00000462658 CHST2Q9Y4C5 530 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 MICAL3Q7RTP6 2002 aa7.56□□□□□ -1.2
UBE4B-204ENST00000462658 H3BML4 177 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 TRIM24O15164 1050 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 LRCH4O75427 683 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 HAUS5O94927 633 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 GJB5O95377 273 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 ZBED1O96006 694 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 FGGP02679 453 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 TCF4P15884 667 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 HTR1BP28222 390 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 SDC4P31431 198 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 PCK1P35558 622 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 GJC1P36383 396 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 DAOAP59103 153 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 YWHAZP63104 245 aaKnown RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 HTRA4P83105 476 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 ITIH3Q06033 890 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 SMARCB1Q12824 385 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 GPR17Q13304 367 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 ERCC6LQ2NKX8 1250 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 TEX35Q5T0J7 233 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 SEL1L2Q5TEA6 688 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 AGAP9Q5VTM2 703 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 TRNP1Q6NT89 227 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 AADACL2Q6P093 401 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 PRSS55Q6UWB4 352 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 VSTM1Q6UX27 236 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 OVCH2Q7RTZ1 564 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 PPP1R3BQ86XI6 285 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 SCN4BQ8IWT1 228 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 KATNAL2Q8IYT4 538 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 RNF168Q8IYW5 571 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 ARFGAP1Q8N6T3 406 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 ATAD1Q8NBU5 361 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 NLGN4YQ8NFZ3 816 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 OR56A1Q8NGH5 318 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 HERVK_113Q902F9 699 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 NDRG1Q92597 394 aaKnown RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 FAM149B1Q96BN6 582 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 CFAP57Q96MR6 1250 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 PGLYRP2Q96PD5 576 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 DCLRE1CQ96SD1 692 aaKnown RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 NAP1L3Q99457 506 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 NCAPGQ9BPX3 1015 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 LBHD1Q9BQE6 289 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 DDX23Q9BUQ8 820 aaKnown RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 VN1R3Q9BXE9 311 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms