RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ERLIN1O75477 346 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 PEX11BO96011 259 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 NME1P15531 152 aaKnown RBP17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 H2AFXP16104 143 aaPredicted RBP17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 ACP1P24666 158 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 MCM3P25205 808 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 FNTAP49354 379 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 RENBPP51606 427 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 SUOXP51687 545 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 CYP4F3Q08477 520 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 C1orf61Q13536 156 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 ZNF235Q14590 738 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 LRRC14Q15048 493 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 WSCD2Q2TBF2 565 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 HES3Q5TGS1 186 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 FBXO38Q6PIJ6 1188 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 PGBD5Q8N414 524 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 ZNF548Q8NEK5 533 aaPredicted RBP17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 ATG4AQ8WYN0 398 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 FATE1Q969F0 183 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 APOLD1Q96LR9 279 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 PSKH2Q96QS6 385 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 FAM118BQ9BPY3 351 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 NLGN3Q9NZ94 848 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 RALYQ9UKM9 306 aaKnown RBP17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 ASPMQ8IZT6 3477 aa17.09■□□□□ 0.33
PRPF40A-204ENST00000450303 NEMP2A6NFY4 417 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 H3BM21 787 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 MATN3O15232 486 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 ALPPL2P10696 532 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 ACTN2P35609 894 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 COILP38432 576 aaPredicted RBP17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 MMP12P39900 470 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 MAXP61244 160 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 TARDBPQ13148 414 aaKnown RBP eCLIP17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 PTK2BQ14289 1009 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 PRKD1Q15139 912 aaPredicted RBP17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 DEFB133Q30KQ1 61 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 FAXCQ5TGI0 409 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 CCDC137Q6PK04 289 aaKnown RBP17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 GSTA5Q7RTV2 222 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 PROSER1Q86XN7 944 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 KLHL7Q8IXQ5 586 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 LRRN4CLQ8ND94 238 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 PDCD6IPQ8WUM4 868 aaKnown RBP17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 HTR3CQ8WXA8 447 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 ECHDC3Q96DC8 303 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 VAT1Q99536 393 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 LGMNQ99538 433 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 PCDHGC4Q9Y5F7 938 aa17.08■□□□□ 0.32
PRPF40A-204ENST00000450303 TRAFD1O14545 582 aaPredicted RBP17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 KCNN4O15554 427 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 AQP9O43315 295 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 ATP8B1O43520 1251 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 PCCBP05166 539 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 CDK4P11802 303 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 RBL1P28749 1068 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 HNF1BP35680 557 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 AP1S1P61966 158 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 YPEL5P62699 121 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 INSM1Q01101 510 aaPredicted RBP17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 C2orf54Q08AI8 447 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 RALGDSQ12967 914 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 ILKQ13418 452 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 INPP5AQ14642 412 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 BRD3Q15059 726 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 TCEA2Q15560 299 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 OASLQ15646 514 aaKnown RBP17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 MARC1Q5VT66 337 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 PHACTR4Q8IZ21 702 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 LRRN4Q8WUT4 740 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 NOD2Q9HC29 1040 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 SCUBE2Q9NQ36 999 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 OGFRQ9NZT2 677 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 SEPT10Q9P0V9 454 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 APOBEC3BQ9UH17 382 aaKnown RBP17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 OR1A2Q9Y585 309 aa17.07■□□□□ 0.32
PRPF40A-204ENST00000450303 LY6G6EA0A0G2JKS1 128 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 GCATO75600 419 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 GAS8O95995 478 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 CKMT1AP12532 417 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 CCNB1P14635 433 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 POLR2LP62875 67 aaKnown RBP17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 DHX34Q14147 1143 aaKnown RBP17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 PRRT3Q5FWE3 981 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 LIPIQ6XZB0 460 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 MACC1Q6ZN28 852 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 RD3Q7Z3Z2 195 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 MAATS1Q7Z4T9 603 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 PDCD7Q8N8D1 485 aaKnown RBP17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 CCDC89Q8N998 374 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 PLA2G15Q8NCC3 412 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 BTN2A2Q8WVV5 523 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 MAML1Q92585 1016 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 TSACCQ96A04 125 aaPredicted RBP17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 NUDCD1Q96RS6 583 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 TMEM121Q9BTD3 319 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 APOOQ9BUR5 198 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 DDX47Q9H0S4 455 aaKnown RBP17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 NT5MQ9NPB1 228 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms