RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PGAP2Q9UHJ9 254 aa3.11□□□□□ -1.91
HMGB1P31-201ENST00000437242 PCDHGB3Q9Y5G1 929 aa3.11□□□□□ -1.91
HMGB1P31-201ENST00000437242 KDM6BO15054 1643 aa3.11□□□□□ -1.91
HMGB1P31-201ENST00000437242 SHROOM2Q13796 1616 aa3.11□□□□□ -1.91
HMGB1P31-201ENST00000437242 ADGRL1O94910 1474 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 FGD5Q6ZNL6 1462 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 CUX1P39880 1505 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 BLOC1S5-TXNDC5H3BN57 136 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 NPHP1O15259 732 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 PCDH7O60245 1069 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 CEP104O60308 925 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 CRLF1O75462 422 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 CHRM4P08173 479 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 PATE4P0C8F1 98 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 PAX1P15863 534 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 PTPN2P17706 415 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 HOXA1P49639 335 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 PAPOLAP51003 745 aaKnown RBP3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 BLKP51451 505 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 CLCNKAP51800 687 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 NR1H2P55055 460 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 TBL3Q12788 808 aaKnown RBP3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 MMEL1Q495T6 779 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 CBWD5Q5RIA9 395 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 CCNYL2Q5T2Q4 361 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 RGMBQ6NW40 437 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 DENND1BQ6P3S1 775 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 WDR63Q8IWG1 891 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 SPAG16Q8N0X2 631 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 SCCPDHQ8NBX0 429 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 KLHDC9Q8NEP7 349 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 RUBCNQ92622 972 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 SNAPC3Q92966 411 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 ZSCAN31Q96LW9 406 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 FAM167BQ9BTA0 163 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 CHODLQ9H9P2 273 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 TINAGQ9UJW2 476 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 PADI1Q9ULC6 663 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 SUFUQ9UMX1 484 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 NFE2L3Q9Y4A8 694 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 ABCA5Q8WWZ7 1642 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 ADCY10Q96PN6 1610 aa3.1□□□□□ -1.91
HMGB1P31-201ENST00000437242 CCDC189A1A4V9 331 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 TK1P04183 234 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 SLC2A4P14672 509 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 S1PR1P21453 382 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 TERF1P54274 439 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 ACTR2P61160 394 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 GRIK2Q13002 908 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 TIGD6Q17RP2 521 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 STXBP5Q5T5C0 1151 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 ANKRD45Q5TZF3 282 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 TRNP1Q6NT89 227 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 MOB3CQ70IA8 216 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 MOGAT3Q86VF5 341 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 CHERPQ8IWX8 916 aaKnown RBP3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 CPXM2Q8N436 756 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 AGBL3Q8NEM8 1001 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 ABTB1Q969K4 478 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 SH3KBP1Q96B97 665 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 ZNF354BQ96LW1 612 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 PYM1Q9BRP8 204 aaKnown RBP3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 HAUS8Q9BT25 410 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 SMYD2Q9NRG4 433 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 TMEM30AQ9NV96 361 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 GJD2Q9UKL4 321 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 GTF2A1LQ9UNN4 478 aa3.09□□□□□ -1.91
HMGB1P31-201ENST00000437242 ADAMTS12P58397 1594 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 C17orf113A0A1B0GUU1 675 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 STX16-NPEPL1H3BU86 382 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 STX16O14662 325 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 NR1D1P20393 614 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 AARSP49588 968 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 LMO4P61968 165 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 TAF5Q15542 800 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 SIRPB2Q5JXA9 342 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 SFMBT2Q5VUG0 894 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 CYP26C1Q6V0L0 522 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 SLC36A4Q6YBV0 504 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 C2CD5Q86YS7 1000 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 HERC6Q8IVU3 1022 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 FTSJ3Q8IY81 847 aaKnown RBP3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 RNF113BQ8IZP6 322 aaKnown RBP3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 C1orf87Q8N0U7 546 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 USP38Q8NB14 1042 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 DUSP19Q8WTR2 217 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 RAB40AQ8WXH6 277 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 CNOT9Q92600 299 aaKnown RBP3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 TBATAQ96M53 351 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 ZNF570Q96NI8 536 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 ATOH8Q96SQ7 321 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 ASCL2Q99929 193 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 MXRA8Q9BRK3 442 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 UBXN6Q9BZV1 441 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 LMAN2LQ9H0V9 348 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 SLC32A1Q9H598 525 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 ITM2CQ9NQX7 267 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 RCOR1Q9UKL0 485 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 LRRFIP2Q9Y608 721 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms