RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PGM2Q96G03 612 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 PRRG4Q9BZD6 226 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 SMPD3Q9NY59 655 aaPredicted RBP13.41□□□□□ -0.26
USP49-203ENST00000394253 ZMYM2Q9UBW7 1377 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 ISPDA4D126 451 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 PLEKP08567 350 aaPredicted RBP13.41□□□□□ -0.26
USP49-203ENST00000394253 APLP1P51693 650 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 C1QBPQ07021 282 aaKnown RBP13.41□□□□□ -0.26
USP49-203ENST00000394253 LIPMQ5VYY2 423 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 OR52E6Q96RD3 313 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 SYT4Q9H2B2 425 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 TIMM8BQ9Y5J9 83 aaPredicted RBP13.41□□□□□ -0.26
USP49-203ENST00000394253 BIVM-ERCC5R4GMW8 1640 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 RFXANKO14593 260 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 C1orf216Q8TAB5 229 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 HMGXB4Q9UGU5 601 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 LOXHD1Q8IVV2 1947 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 TPP1O14773 563 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 RORAP35398 523 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 ZNF782Q6ZMW2 699 aaPredicted RBP13.41□□□□□ -0.26
USP49-203ENST00000394253 ZNF557Q8N988 423 aaPredicted RBP13.41□□□□□ -0.26
USP49-203ENST00000394253 GTF3C2Q8WUA4 911 aaPredicted RBP13.41□□□□□ -0.26
USP49-203ENST00000394253 TCEAL4Q96EI5 215 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 KCTD15Q96SI1 283 aaPredicted RBP13.41□□□□□ -0.26
USP49-203ENST00000394253 ABCC10Q5T3U5 1492 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 OR1G1P47890 313 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 CPT1AP50416 773 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 PIWIL4Q7Z3Z4 852 aaKnown RBP13.41□□□□□ -0.26
USP49-203ENST00000394253 UBA3Q8TBC4 463 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 KLHL15Q96M94 604 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 DMRTB1Q96MA1 342 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 APBA2Q99767 749 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 ANKEF1Q9NU02 776 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 CFAP97Q9P2B7 532 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 FADS3Q9Y5Q0 445 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 DCLK1O15075 740 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 ELK3P41970 407 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 ECT2LQ008S8 904 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 DDR1Q08345 913 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 DLG2Q15700 870 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 ASTE1Q2TB18 679 aaPredicted RBP13.41□□□□□ -0.26
USP49-203ENST00000394253 GALNT15Q8N3T1 639 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 ETNPPLQ8TBG4 499 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 DPP7Q9UHL4 492 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 TRAF6Q9Y4K3 522 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 LMTK3Q96Q04 1460 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 A0A075B6Q4 140 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 PGAM2P15259 253 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 LHX1P48742 406 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 ARSKQ6UWY0 536 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 ADGRG6Q86SQ4 1221 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 SGMS1Q86VZ5 419 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 VAT1Q99536 393 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 SEC14L4Q9UDX3 406 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 IKZF2Q9UKS7 526 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 PCDHGB7Q9Y5F8 929 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 TRPV2Q9Y5S1 764 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 EFCAB9A8MZ26 197 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 SCGB2A1O75556 95 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 OTCP00480 354 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 PRKCDQ05655 676 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 RNASEH2BQ5TBB1 312 aaKnown RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 NKAPQ8N5F7 415 aaKnown RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 NKD1Q969G9 470 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 HIST1H2AAQ96QV6 131 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 RAVER2Q9HCJ3 691 aaKnown RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 CBX4O00257 560 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 RAMP2O60895 175 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 VAPBO95292 243 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 ANGPTL1O95841 491 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 UBXN11Q5T124 520 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 LZTR1Q8N653 840 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 OR4A15Q8NGL6 344 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 CLP1Q92989 425 aaKnown RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 DBNDD1Q9H9R9 158 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 CYTH4Q9UIA0 394 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 OR6C70A6NIJ9 312 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 PON1P27169 355 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 KLHL22Q53GT1 634 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 ARSHQ5FYA8 562 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 TCTEX1D2Q8WW35 142 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 LPAR1Q92633 364 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 ZSWIM3Q96MP5 696 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 THG1LQ9NWX6 298 aaKnown RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 ZNF705EA8MWA4 302 aaPredicted RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 RASGRP1O95267 797 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 TGDSO95455 350 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 ITGB3P05106 788 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 RPA3P35244 121 aaPredicted RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 ATAD3CQ5T2N8 411 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 ADCY4Q8NFM4 1077 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 TMEM143Q96AN5 459 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 SYT15Q9BQS2 421 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 HCN1O60741 890 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 PLK1P53350 603 aa13.4□□□□□ -0.26
USP49-203ENST00000394253 ZNF772Q68DY9 489 aaPredicted RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 FIP1L1Q6UN15 594 aaKnown RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 NECAB3Q96P71 396 aaPredicted RBP13.4□□□□□ -0.26
USP49-203ENST00000394253 NODALQ96S42 347 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms