RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 GPR34Q9UPC5 381 aa11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SNX24Q9Y343 169 aa11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 LZTS3O60299 673 aaPredicted RBP11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 POLBP06746 335 aa11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 AVPR2P30518 371 aa11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SPAM1P38567 509 aa11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 MAGEA4P43358 317 aa11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 DHX9Q08211 1270 aaKnown RBP11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 ITGA9Q13797 1035 aa11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 MACC1Q6ZN28 852 aa11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 TSTD1Q8NFU3 115 aa11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 OR52K1Q8NGK4 314 aa11.14□□□□□ -0.63
CSGALNACT2-201ENST00000374466 C17orf113A0A1B0GUU1 675 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 TCRBV21S2A2A0A5A6 115 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 MID1O15344 667 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 MAXP61244 160 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 VSNL1P62760 191 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 CRYMQ14894 314 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 ALS2CLQ60I27 953 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 Q6ZS52 159 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 IQCKQ8N0W5 287 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 FAM118BQ9BPY3 351 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 FOXQ1Q9C009 403 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SYBUQ9NX95 663 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 NINJ2Q9NZG7 142 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SLC17A4Q9Y2C5 497 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 DGKBQ9Y6T7 804 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 MAP2K7O14733 419 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 RIPK2O43353 540 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 EPN2O95208 641 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 APRTP07741 180 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 ZNF883P0CG24 379 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 STAT4Q14765 748 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 LDLRAP1Q5SW96 308 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 PMS2CLQ68D20 193 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 PDLIM5Q96HC4 596 aaKnown RBP11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 RABGEF1Q9UJ41 708 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 CHKBQ9Y259 395 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 PCDHGB2Q9Y5G2 931 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 COL27A1Q8IZC6 1860 aaPredicted RBP11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 PRR5-ARHGAP8B1AHC4 643 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 E7EVH7 732 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SCAMP3O14828 347 aaKnown RBP11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 YKT6O15498 198 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 GJB3O75712 270 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 CD27P26842 260 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 MAPK9P45984 424 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 WASH2PQ6VEQ5 465 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 UNC5AQ6ZN44 842 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 WASH6PQ9NQA3 447 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SEPT10Q9P0V9 454 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 PCDHB1Q9Y5F3 818 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 ACTL7BQ9Y614 415 aa11.13□□□□□ -0.63
CSGALNACT2-201ENST00000374466 F8W8V4 182 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 H3BMM5 538 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 FOXD2O60548 495 aaPredicted RBP11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 UGT2B4P06133 528 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 DNA2P51530 1060 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 BASP1P80723 227 aaKnown RBP11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SETMARQ53H47 684 aaPredicted RBP11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 AGAP9Q5VTM2 703 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 MZB1Q8WU39 189 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 CDKN2AIPNLQ96HQ2 116 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 ZNF514Q96K75 400 aaPredicted RBP11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SPACA7Q96KW9 195 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 ABCG8Q9H221 673 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 LRRC4CQ9HCJ2 640 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 PCOLCE2Q9UKZ9 415 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 PCDHGC4Q9Y5F7 938 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 PRAMEF26H0Y7S4 382 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 WNT9AO14904 365 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 AXIN1O15169 862 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 DFNA5O60443 496 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 BPIP17213 487 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 PHBP35232 272 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 KLHL38Q2WGJ6 581 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 FBXO15Q8NCQ5 510 aaPredicted RBP11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 IPMKQ8NFU5 416 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 FCRL3Q96P31 734 aaPredicted RBP11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SH3GL2Q99962 352 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 PCDHB9Q9Y5E1 797 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 RANBP2P49792 3224 aaKnown RBP11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 A0A1W2PPC4 97 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 SP9P0CG40 484 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 HLA-EP13747 358 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 CTBSQ01459 385 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 MGAT5Q09328 741 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 ZKSCAN8Q15776 578 aaPredicted RBP11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 UAP1Q16222 522 aaPredicted RBP11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 ZNF423Q2M1K9 1284 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 TEDDM1Q5T9Z0 273 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 LRRC66Q68CR7 880 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 ADGRD1Q6QNK2 874 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 XKR5Q6UX68 686 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 IGDCC3Q8IVU1 814 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 MTBPQ96DY7 904 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 CPNE1Q99829 537 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 DYRK4Q9NR20 520 aa11.12□□□□□ -0.63
CSGALNACT2-201ENST00000374466 A0A087WUV0 522 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms