RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SCUBE3Q8IX30 993 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 KIAA2013Q8IYS2 634 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 Q8N9G6 341 aaPredicted RBP10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 ACVR1CQ8NER5 493 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 ANKK1Q8NFD2 765 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 OSCP1Q8WVF1 389 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 MED30Q96HR3 178 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 IL12RB2Q99665 862 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC39A3Q9BRY0 314 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 C17orf80Q9BSJ5 609 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 ING2Q9H160 280 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 TRIT1Q9H3H1 467 aaKnown RBP10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 SOX17Q9H6I2 414 aaPredicted RBP10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 MARCH7Q9H992 704 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 SPON1Q9HCB6 807 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 CASS4Q9NQ75 786 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 CRNNQ9UBG3 495 aaPredicted RBP10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 BAG5Q9UL15 447 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC39A10Q9ULF5 831 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 NDUFAF1Q9Y375 327 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 NAALAD2Q9Y3Q0 740 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 PCDHGA11Q9Y5H2 935 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 TBKBP1A7MCY6 615 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 F5H423 210 aaPredicted RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 SNPHO15079 494 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 GPC4O75487 556 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 C22orf31O95567 290 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 LDLRP01130 860 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 HTR1AP08908 422 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC35E2BP0CK96 405 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 BMP1P13497 986 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 PSMB4P28070 264 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 CASP3P42574 277 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 MATKP42679 507 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 NR4A2P43354 598 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 ZNF135P52742 658 aaPredicted RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 PPP5CP53041 499 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 CLCQ05315 142 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 FOXM1Q08050 763 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 TOP3AQ13472 1001 aaPredicted RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 GRM3Q14832 879 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC25A52Q3SY17 297 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 TAS2R42Q7RTR8 314 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 R3HCC1LQ7Z5L2 792 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 RETREG3Q86VR2 466 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 KCNMB4Q86W47 210 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 APOBEC3FQ8IUX4 373 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 CENPLQ8N0S6 344 aaPredicted RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 CLIP4Q8N3C7 705 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 CCNYL1Q8N7R7 359 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 BEST2Q8NFU1 509 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC22A17Q8WUG5 538 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 KCTD4Q8WVF5 259 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 ELMO2Q96JJ3 720 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 SH3GL1Q99961 368 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 MINDY3Q9H8M7 445 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 GTSE1Q9NYZ3 720 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 XPR1Q9UBH6 696 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 HACL1Q9UJ83 578 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 TRHDEQ9UKU6 1024 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 UGT2A1Q9Y4X1 527 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 TNS1Q9HBL0 1735 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 COL1A2P08123 1366 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 MN1Q10571 1320 aaPredicted RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 MYO18AQ92614 2054 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 PSMD3O43242 534 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 HOXC11O43248 304 aaPredicted RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 GSNP06396 782 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 ENDOUP21128 410 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 EIF2DP41214 584 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 ABCG1P45844 678 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 GLRBP48167 497 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 TRPC1P48995 793 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 C1QTNF8P60827 252 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 CYP51A1Q16850 503 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 DCAF4L1Q3SXM0 396 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 PAGE2BQ5JRK9 111 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 SIGIRRQ6IA17 410 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 TAF2Q6P1X5 1199 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 CATSPER4Q7RTX7 472 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 BNIPLQ7Z465 357 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 ZC3HC1Q86WB0 502 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 PTRH1Q86Y79 214 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 FUNDC1Q8IVP5 155 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 ZNF567Q8N184 647 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 CRYBG2Q8N1P7 616 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 LINC01465Q8N7H1 131 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 C12orf29Q8N999 325 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 OR7A2PQ8NGA2 310 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 VPS33AQ96AX1 596 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 RDH12Q96NR8 316 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 GPR78Q96P69 363 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC9A7Q96T83 725 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 VAT1Q99536 393 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 OSBPL2Q9H1P3 480 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 RHOJQ9H4E5 214 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 EML4Q9HC35 981 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 ANKHQ9HCJ1 492 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 MAP10Q9P2G4 905 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms