RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 MAGEE2Q8TD90 523 aaPredicted RBP15.52■□□□□ 0.07
DDX55-201ENST00000238146 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.52■□□□□ 0.07
DDX55-201ENST00000238146 TSPAN17Q96FV3 270 aa15.52■□□□□ 0.07
DDX55-201ENST00000238146 PRKD2Q9BZL6 878 aa15.52■□□□□ 0.07
DDX55-201ENST00000238146 DSEQ9UL01 958 aa15.52■□□□□ 0.07
DDX55-201ENST00000238146 NEU3Q9UQ49 428 aa15.52■□□□□ 0.07
DDX55-201ENST00000238146 VWA7Q9Y334 891 aa15.52■□□□□ 0.07
DDX55-201ENST00000238146 A0A0G2JLL6 359 aaPredicted RBP15.51■□□□□ 0.07
DDX55-201ENST00000238146 K7EPI3 171 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 FZD9O00144 591 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 GABRDO14764 452 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 XPOTO43592 962 aaKnown RBP15.51■□□□□ 0.07
DDX55-201ENST00000238146 SNAP29O95721 258 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 HLA-DQB2P05538 268 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 MYL3P08590 195 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 NFATC3Q12968 1075 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 SPIDRQ14159 915 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 XKR4Q5GH76 650 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 RAB41Q5JT25 222 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 C16orf87Q6PH81 154 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 PRRT2Q7Z6L0 340 aaPredicted RBP15.51■□□□□ 0.07
DDX55-201ENST00000238146 PHYKPLQ8IUZ5 450 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 SH3RF2Q8TEC5 729 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 SELENONQ9NZV5 590 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 TMEM9Q9P0T7 183 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 PCDHA9Q9Y5H5 950 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 PPP2R3BQ9Y5P8 575 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 J3QRK9 145 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 PIP5K1BO14986 540 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 MATN3O15232 486 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 CDK14O94921 469 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 FCGR1AP12314 374 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 MATN1P21941 496 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 HLCSP50747 726 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 FOXA1P55317 472 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 TRAF2Q12933 501 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 ZC3H7AQ8IWR0 971 aaKnown RBP15.51■□□□□ 0.07
DDX55-201ENST00000238146 FBXL8Q96CD0 374 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 SIK2Q9H0K1 926 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 GID8Q9NWU2 228 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 IFT80Q9P2H3 777 aaPredicted RBP15.51■□□□□ 0.07
DDX55-201ENST00000238146 TCRBV5S2A0A599 114 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 SOBPA7XYQ1 873 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 WISP3O95389 354 aaPredicted RBP15.51■□□□□ 0.07
DDX55-201ENST00000238146 ADCYAP1R1P41586 468 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 BCAP31P51572 246 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 APLP1P51693 650 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 MAPK10P53779 464 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 CDKN2DP55273 166 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 HERVK_113P63132 956 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 LDB1Q86U70 411 aaPredicted RBP15.51■□□□□ 0.07
DDX55-201ENST00000238146 TAC4Q86UU9 113 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 IFNEQ86WN2 208 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 OR13F1Q8NGS4 319 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 CALML6Q8TD86 181 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 CHPT1Q8WUD6 406 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 RNF34Q969K3 372 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 PTERQ96BW5 349 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 TUBA1CQ9BQE3 449 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 ERVK-6Q9BXR3 956 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 YTHDF1Q9BYJ9 559 aaKnown RBP15.51■□□□□ 0.07
DDX55-201ENST00000238146 SLC39A8Q9C0K1 460 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 SLC52A3Q9NQ40 469 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 RBM22Q9NW64 420 aaKnown RBP eCLIP15.51■□□□□ 0.073e-13■■■■■ 30.2
DDX55-201ENST00000238146 PKD2L2Q9NZM6 624 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 CORINQ9Y5Q5 1042 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 CSADQ9Y600 493 aa15.51■□□□□ 0.07
DDX55-201ENST00000238146 MRPL42Q9Y6G3 142 aaKnown RBP15.51■□□□□ 0.07
DDX55-201ENST00000238146 MYBPHLA2RUH7 354 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 CPNE6O95741 557 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 GSK3BP49841 420 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 ADARB1P78563 741 aaKnown RBP15.5■□□□□ 0.07
DDX55-201ENST00000238146 EN1Q05925 392 aaPredicted RBP15.5■□□□□ 0.07
DDX55-201ENST00000238146 RABL3Q5HYI8 236 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 CCNYL2Q5T2Q4 361 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 PPP1R13LQ8WUF5 828 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 TWIST2Q8WVJ9 160 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 TMEM125Q96AQ2 219 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 PCED1BQ96HM7 432 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 CNDP2Q96KP4 475 aaKnown RBP15.5■□□□□ 0.07
DDX55-201ENST00000238146 ZFYVE28Q9HCC9 887 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 SDR39U1Q9NRG7 319 aaPredicted RBP15.5■□□□□ 0.07
DDX55-201ENST00000238146 PIN4Q9Y237 131 aaKnown RBP15.5■□□□□ 0.07
DDX55-201ENST00000238146 PDCD11Q14690 1871 aaKnown RBP15.5■□□□□ 0.07
DDX55-201ENST00000238146 SIX3O95343 332 aaPredicted RBP15.5■□□□□ 0.07
DDX55-201ENST00000238146 MATN4O95460 622 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 FGF4P08620 206 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 DARSP14868 501 aaKnown RBP15.5■□□□□ 0.07
DDX55-201ENST00000238146 IDO1P14902 403 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 NCK1P16333 377 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 CCNA2P20248 432 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 BDNFP23560 247 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 ATP1A4Q13733 1029 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 PCSK7Q16549 785 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 PIM3Q86V86 326 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 SLC15A4Q8N697 577 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 ARRDC4Q8NCT1 418 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 DNAJB14Q8TBM8 379 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 MTG1Q9BT17 334 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms