RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Tbc1d17Q8BYH7 645 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 GrpQ8R1I2 146 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Slco3a1Q8R3L5 710 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Cttnbp2nlQ99LJ0 638 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Fcf1Q9CTH6 198 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Fhl5Q9WTX7 284 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Gm12248A0A1W2P8B8 313 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Art2bO35975 289 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Sult1e1P49891 295 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Hbq1bQ3U0A6 142 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Spata48Q5NC83 441 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Htr1aQ64264 421 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Klhl23Q6GQU2 558 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Olfr855Q7TRF8 312 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Znf879Q8BI99 563 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Slco6c1Q8C0X7 706 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Aph1bQ8C7N7 257 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Rab44Q8CB87 725 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Sec13Q9D1M0 322 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 EefsecQ9JHW4 583 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Coro1cQ9WUM4 474 aa22.7■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Gm21964A0A1W2P7S4 437 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Zfp846G3X996 541 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 ChrngP04760 519 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 PolP11369 1281 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 St14P56677 855 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Glt6d1Q2NKH9 311 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 CamkmtQ3U2J5 323 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Tnfaip2Q61333 691 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cspg5Q71M36 566 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Syt14Q7TN84 555 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Olfr1505Q7TQQ2 316 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Clptm1lQ8BXA5 539 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Washc5Q8C2E7 1159 aaKnown RBP22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Sh3kbp1Q8R550 709 aaKnown RBP22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Serpina3nQ91WP6 418 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Fam174aQ9D3L0 190 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Prss23Q9D6X6 382 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Myo1cQ9WTI7 1063 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Orc1Q9Z1N2 840 aaKnown RBP22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Dio2Q9Z1Y9 266 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cib2Q9Z309 187 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 AspmQ8CJ27 3122 aa22.69■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Olfr742A2RTP5 311 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Syngr1O55100 234 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Gria2P23819 883 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Perm1Q149B8 807 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Zmym5Q3U2E2 627 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Ube2zQ3UE37 356 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Usp30Q3UN04 517 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Ssx9Q6XAS3 170 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 LnpepQ8C129 1025 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cwf19l1Q8CI33 537 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Snx15Q91WE1 337 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cts3Q91ZD5 332 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Q9CPS8 106 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Lsm7Q9CQQ8 103 aaKnown RBP22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 PdiltQ9DAN1 588 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Riok3Q9DBU3 519 aaKnown RBP22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Ppm1dQ9QZ67 598 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 AadatQ9WVM8 425 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Piezo1E2JF22 2547 aa22.68■■□□□ 1.22
Scn1b-201ENSMUST00000098548 6720489N17RikA0A1Y7VJW0 127 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Ttll9A2APC3 461 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Slc1a6O35544 561 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Snx3O70492 162 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 P01668 110 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 ItgavP43406 1044 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Rasgrf2P70392 1189 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cyb5r2Q3KNK3 276 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Olfr464Q5SW48 313 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Arcn1Q5XJY5 511 aaKnown RBP22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Sema4cQ64151 834 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Slc16a9Q7TM99 508 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Prkaa2Q8BRK8 552 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Elp2Q91WG4 831 aaKnown RBP22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Setd6Q9CWY3 473 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Get4Q9D1H7 327 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Q9D5Y0 588 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 H2afyQ9QZQ8 372 aaKnown RBP22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Pcm1Q9R0L6 2025 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Gm14781A2A9Q9 366 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Serpinb3cA2RSF9 386 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Tsga10ipF7A1F0 157 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Nsmce4aG3XA30 381 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Sypl1O09117 261 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Ncam2O35136 837 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Npr1P18293 1057 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Gdi1P50396 447 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Atp5bP56480 529 aaKnown RBP22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Mageb5Q14AN0 366 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Tmem184cQ3TPR7 525 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Tnks2Q3UES3 1166 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Nat9Q3UG98 241 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cog7Q3UM29 770 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Galnt10Q6P9S7 603 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Paqr6Q6TCG5 343 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Trmt10aQ8C1Z8 328 aaKnown RBP22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Olfr1019Q8VGS3 310 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Ndufs1Q91VD9 727 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms