RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Agr3Q8R3W7 165 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rprd1aQ8VDS4 312 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Tnip2Q99JG7 430 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rsph9Q9D9V4 276 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Strn3Q9ERG2 796 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gfra4Q9JJT2 260 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 CtsmQ9JL96 333 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Dnajb7Q9QYI8 312 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Usp21Q9QZL6 566 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ap4b1Q9WV76 738 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Slc23a1Q9Z2J0 605 aa8.29□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mtx3D3YTP3 312 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Kcnt2D3Z649 1135 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Vmn2r96E9PZU5 664 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cyp2j12G3UXT0 502 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm3248K7N721 186 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm3739L7N296 216 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Akap3O88987 864 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 AldoaP05064 364 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pim1P06803 397 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Dpf3P58269 378 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Atp9bP98195 1146 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Eps8Q08509 821 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gpatch4Q3TFK5 415 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Zfp217Q3U0X6 1041 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Crtc2Q3U182 692 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Snx27Q3UHD6 539 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ankrd53Q3V0J4 497 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Q5EBG8 199 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Dlx3Q64205 287 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Scube3Q66PY1 993 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Krt73Q6NXH9 539 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Entpd3Q8BFW6 529 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mtrf1lQ8BJU9 373 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mrps35Q8BJZ4 320 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 SowahaQ8BLS7 548 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ankrd52Q8BTI7 1076 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ptrh1Q8BW00 204 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Sept11Q8C1B7 431 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 C8aQ8K182 587 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cdhr5Q8VHF2 831 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ppp1r16bQ8VHQ3 568 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 MvdQ99JF5 401 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mat2bQ99LB6 334 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Kif19Q99PT9 997 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Acbd6Q9D061 282 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Agpat3Q9D517 376 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 RhojQ9ER71 214 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Chrnb2Q9ERK7 501 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ap3m1Q9JKC8 418 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Slc4a11A2AJN7 862 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm281D3Z1Y0 860 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ces1bD3Z5G7 567 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Kbtbd6E9PYD7 486 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Kdelc2G5E897 503 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Kbtbd7G5E8C2 690 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Vmn2r19G5E8G4 854 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Socs2O35717 198 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cdh3P10287 822 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Acvr2bP27040 536 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Il12aP43431 215 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rpl36P47964 105 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm11437Q5QR91 290 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 PhgdhQ61753 533 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Krt72Q6IME9 520 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Bhlhb9Q6PB60 539 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cdh7Q8BM92 785 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 C1qtnf7Q8BVD7 289 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Camk1dQ8BW96 385 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Acsm2Q8K0L3 575 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Lrrc4Q99PH1 652 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Smim23Q9DAL0 136 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rmdn1Q9DCV4 305 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Fut2Q9JL27 347 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Abhd1Q9QZC8 412 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cyp4a30bA0A087WS15 508 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ssxb8B1AY40 170 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Vmn2r100E9QAZ9 850 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Srp72F8VQC1 671 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pabpc4lG5E8X2 370 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pot1bH7BX60 640 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Vmn2r5K7N788 911 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Capn5O08688 640 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 MrasO08989 208 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Dsg3O35902 993 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gjb3P28231 270 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Csf3rP40223 837 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Padi2Q08642 673 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cyb5r2Q3KNK3 276 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cmpk2Q3U5Q7 447 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Klhl17Q6TDP3 640 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rpl10Q6ZWV3 214 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Tas2r115Q7M719 310 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 AftphQ80WT5 931 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 BspryQ80YW5 473 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Nup107Q8BH74 926 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 GanabQ8BHN3 944 aaKnown RBP8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Fra10ac1Q8BP78 315 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 SgczQ8BX51 311 aa8.28□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rbm14Q8C2Q3 669 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms