RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 DHTKD1Q96HY7 919 aaPredicted RBP3.47□□□□□ -1.85
TCF4-250ENST00000625849 REXO5Q96IC2 774 aaKnown RBP3.47□□□□□ -1.85
TCF4-250ENST00000625849 ZNF414Q96IQ9 312 aa3.47□□□□□ -1.85
TCF4-250ENST00000625849 ATOH8Q96SQ7 321 aa3.47□□□□□ -1.85
TCF4-250ENST00000625849 TTC12Q9H892 705 aaPredicted RBP3.47□□□□□ -1.85
TCF4-250ENST00000625849 CLK4Q9HAZ1 481 aaKnown RBP3.47□□□□□ -1.85
TCF4-250ENST00000625849 PTPRHQ9HD43 1115 aa3.47□□□□□ -1.85
TCF4-250ENST00000625849 Q9N2J8 555 aa3.47□□□□□ -1.85
TCF4-250ENST00000625849 SMARCAL1Q9NZC9 954 aa3.47□□□□□ -1.85
TCF4-250ENST00000625849 ORC3Q9UBD5 711 aaPredicted RBP3.47□□□□□ -1.85
TCF4-250ENST00000625849 DDX25Q9UHL0 483 aaKnown RBP3.47□□□□□ -1.85
TCF4-250ENST00000625849 CORO1CQ9ULV4 474 aaPredicted RBP3.47□□□□□ -1.85
TCF4-250ENST00000625849 TMED5Q9Y3A6 229 aa3.47□□□□□ -1.85
TCF4-250ENST00000625849 DAAM1Q9Y4D1 1078 aa3.47□□□□□ -1.85
TCF4-250ENST00000625849 UGGT2Q9NYU1 1516 aa3.47□□□□□ -1.85
TCF4-250ENST00000625849 NRXN1Q9ULB1 1477 aa3.47□□□□□ -1.85
TCF4-250ENST00000625849 CROCC2H7BZ55 1655 aa3.46□□□□□ -1.85
TCF4-250ENST00000625849 CPSF1Q10570 1443 aaKnown RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 FAM135BQ49AJ0 1406 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 ADGRL3Q9HAR2 1447 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 LMTK2Q8IWU2 1503 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 ABCA9Q8IUA7 1624 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 BIRC5O15392 142 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 TIMM44O43615 452 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 PRC1O43663 620 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 MTRF1O75570 445 aaKnown RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 KIAA0754O94854 1291 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 HLA-DQA2P01906 255 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 CCDC166P0CW27 439 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 SLC5A1P13866 664 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 ZNF24P17028 368 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 HOXB9P17482 250 aaPredicted RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 FGFR2P21802 821 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 PAX3P23760 479 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 AMPHP49418 695 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 PAPOLAP51003 745 aaKnown RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 CCNHP51946 323 aaPredicted RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 UBE2HP62256 183 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 MRPS25P82663 173 aaKnown RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 ADORA2A-AS1P86434 159 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 CUL3Q13618 768 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 CLPPQ16740 277 aaPredicted RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 CCDC152Q4G0S7 254 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 SYTL3Q4VX76 610 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 CMPK2Q5EBM0 449 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 LRRC31Q6UY01 552 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 STXBP4Q6ZWJ1 553 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 BEND5Q7L4P6 421 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 C14orf80Q86SX3 495 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 LCA5Q86VQ0 697 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 CADM4Q8NFZ8 388 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 TRIM58Q8NG06 486 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 GTF3C6Q969F1 213 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 ZKSCAN4Q969J2 545 aaPredicted RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 THOC1Q96FV9 657 aaKnown RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 FAM81BQ96LP2 452 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 CCDC114Q96M63 670 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 C16orf45Q96MC5 204 aaPredicted RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 SMC6Q96SB8 1091 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 RUFY1Q96T51 708 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 JPH2Q9BR39 696 aaPredicted RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 FUCA2Q9BTY2 467 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 CCDC28BQ9BUN5 200 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 TMEM120AQ9BXJ8 343 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 LHPPQ9H008 270 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 DDX21Q9NR30 783 aaKnown RBP eCLIP3.46□□□□□ -1.86
TCF4-250ENST00000625849 PDRG1Q9NUG6 133 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 EXOC1Q9NV70 894 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 SPATA7Q9P0W8 599 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 CTNNAL1Q9UBT7 734 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 PAIP2BQ9ULR5 123 aaKnown RBP3.46□□□□□ -1.86
TCF4-250ENST00000625849 TMCO1Q9UM00 188 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 ZNF148Q9UQR1 794 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 TMEM98Q9Y2Y6 226 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 ZNF711Q9Y462 761 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.46□□□□□ -1.86
TCF4-250ENST00000625849 PRSS21Q9Y6M0 314 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 FANCAO15360 1455 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 ATP7BP35670 1465 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 ABCC10Q5T3U5 1492 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 FGD5Q6ZNL6 1462 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 LAMC3Q9Y6N6 1575 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 CUL7Q14999 1698 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 PBRM1Q86U86 1689 aa3.46□□□□□ -1.86
TCF4-250ENST00000625849 SH3TC1Q8TE82 1336 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 USP32Q8NFA0 1604 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 CC2D2AQ9P2K1 1620 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 TBC1D3DA0A087WVF3 549 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 TBC1D3IA0A087WXS9 549 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 TBC1D3EA0A087X179 549 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 TBC1D3KA0A087X1G2 549 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 GOLGA6L10A0A0M3HER8 536 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 TARSL2A2RTX5 802 aaKnown RBP3.45□□□□□ -1.86
TCF4-250ENST00000625849 TBC1D3BA6NDS4 549 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 TBC1D3FA6NER0 549 aaPredicted RBP3.45□□□□□ -1.86
TCF4-250ENST00000625849 RHPN2P1A8MT19 583 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 TBC1D3LB9A6J9 549 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 TIMM23O14925 209 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 CYTH3O43739 400 aa3.45□□□□□ -1.86
TCF4-250ENST00000625849 CREB3O43889 395 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms