RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 USP12O75317 370 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 ELFN1P0C7U0 828 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 GNSP15586 552 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 ZNF30P17039 623 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 CASQ1P31415 396 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 PTGIRP43119 386 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 CTSKP43235 329 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 AFF3P51826 1226 aaKnown RBP13.75□□□□□ -0.21
VRK3-219ENST00000600137 EPHB1P54762 984 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 PFN3P60673 137 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 SGCGQ13326 291 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 SEMA5AQ13591 1074 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 KIF19Q2TAC6 998 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 TPRG1LQ5T0D9 272 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 CCDC137Q6PK04 289 aaKnown RBP13.75□□□□□ -0.21
VRK3-219ENST00000600137 PRR23CQ6ZRP0 262 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 LYSMD3Q7Z3D4 306 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 IQCHQ86VS3 1027 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 NDUFAF2Q8N183 169 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 TTC30BQ8N4P2 665 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 TAB3Q8N5C8 712 aaPredicted RBP13.75□□□□□ -0.21
VRK3-219ENST00000600137 SLC25A41Q8N5S1 370 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
VRK3-219ENST00000600137 PLA2G15Q8NCC3 412 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 DTD2Q96FN9 168 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 IFT43Q96FT9 208 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 C16orf45Q96MC5 204 aaPredicted RBP13.75□□□□□ -0.21
VRK3-219ENST00000600137 APOL2Q9BQE5 337 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 FICDQ9BVA6 458 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 CAAP1Q9H8G2 361 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 PAK5Q9P286 719 aa13.75□□□□□ -0.21
VRK3-219ENST00000600137 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.75□□□□□ -0.21
VRK3-219ENST00000600137 BPTFQ12830 3046 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 GOLGA8CPA6NN73 597 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 K7ESM1 405 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 TLR4O00206 839 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 ARHGAP33O14559 1287 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 KHNYNO15037 678 aaKnown RBP13.74□□□□□ -0.21
VRK3-219ENST00000600137 LZTS3O60299 673 aaPredicted RBP13.74□□□□□ -0.21
VRK3-219ENST00000600137 GDF9O60383 454 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 SUN1O94901 812 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 AP2A1O95782 977 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 SOD1P00441 154 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 HLA-DPA1P20036 260 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 AKT2P31751 481 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 TRIM23P36406 574 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 FDFT1P37268 417 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 ETV3P41162 512 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 GRIA1P42261 906 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 FNTAP49354 379 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 PRPSAP1Q14558 356 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 STAT4Q14765 748 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 IRF4Q15306 451 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 RABEPKQ7Z6M1 372 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 NLRP8Q86W28 1048 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 RAVER1Q8IY67 606 aaKnown RBP13.74□□□□□ -0.21
VRK3-219ENST00000600137 SLC22A18ASQ8N1D0 253 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 PAF1Q8N7H5 531 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 OR13H1Q8NG92 308 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 DDX47Q9H0S4 455 aaKnown RBP13.74□□□□□ -0.21
VRK3-219ENST00000600137 ABCG8Q9H221 673 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 RNF14Q9UBS8 474 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 PCYOX1Q9UHG3 505 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 PNMA8BQ9ULN7 279 aaPredicted RBP13.74□□□□□ -0.21
VRK3-219ENST00000600137 SHOC2Q9UQ13 582 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 ANKRD6Q9Y2G4 727 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 SNX11Q9Y5W9 270 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 MYLKQ15746 1914 aa13.74□□□□□ -0.21
VRK3-219ENST00000600137 ASCC3Q8N3C0 2202 aaKnown RBP13.74□□□□□ -0.21
VRK3-219ENST00000600137 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.73□□□□□ -0.21
VRK3-219ENST00000600137 C1orf232A0A0U1RR37 186 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 CFIP05156 583 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 FGF1P05230 155 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 ENGP17813 658 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 SPINT3P49223 89 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 NXPH1P58417 271 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 DPTQ07507 201 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 GRIK2Q13002 908 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 LRRC14Q15048 493 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 ACOX1Q15067 660 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 TRIP13Q15645 432 aaPredicted RBP13.73□□□□□ -0.21
VRK3-219ENST00000600137 KYAT3Q6YP21 454 aaKnown RBP13.73□□□□□ -0.21
VRK3-219ENST00000600137 Q6ZSR6 202 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 OR2I1PQ8NGU4 316 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 SLCO2A1Q92959 643 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 SCAMP4Q969E2 229 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 TRIM44Q96DX7 344 aaPredicted RBP13.73□□□□□ -0.21
VRK3-219ENST00000600137 PPP1R2P1Q96PQ5 205 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 AGAP2Q99490 1192 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 TBL1YQ9BQ87 522 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 ZFYVE1Q9HBF4 777 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 AASDHPPTQ9NRN7 309 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 RAB6BQ9NRW1 208 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 ZNF711Q9Y462 761 aa13.73□□□□□ -0.21
VRK3-219ENST00000600137 TCRBV7S3A2A0A539 114 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 PSMD3O43242 534 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 KRT14P02533 472 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 THEGLP0DJG4 465 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 NFKBIAP25963 317 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 IVDP26440 423 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms