RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 MIER2Q8N344 545 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 OLFM1Q99784 485 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 DUSP16Q9BY84 665 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 MUC13Q9H3R2 512 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 AKTIPQ9H8T0 292 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 WDR6Q9NNW5 1121 aaKnown RBP12.61□□□□□ -0.39
ZNF558-205ENST00000597304 ZFC3H1O60293 1989 aaKnown RBP12.61□□□□□ -0.39
ZNF558-205ENST00000597304 KPNA4O00629 521 aaPredicted RBP12.61□□□□□ -0.39
ZNF558-205ENST00000597304 E2F6O75461 281 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 SEC14L2O76054 403 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 MTHFD1P11586 935 aaKnown RBP12.61□□□□□ -0.39
ZNF558-205ENST00000597304 JUNBP17275 347 aaPredicted RBP12.61□□□□□ -0.39
ZNF558-205ENST00000597304 POLR2IP36954 125 aaKnown RBP12.61□□□□□ -0.39
ZNF558-205ENST00000597304 ARL13BQ3SXY8 428 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 BROXQ5VW32 411 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 LINC01465Q8N7H1 131 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 PTCD2Q8WV60 388 aaKnown RBP12.61□□□□□ -0.39
ZNF558-205ENST00000597304 LRRC58Q96CX6 371 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 CELF6Q96J87 481 aaKnown RBP12.61□□□□□ -0.39
ZNF558-205ENST00000597304 TNIP3Q96KP6 325 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 GLT1D1Q96MS3 346 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 CORO1BQ9BR76 489 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 FICDQ9BVA6 458 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 GPN2Q9H9Y4 310 aaPredicted RBP12.61□□□□□ -0.39
ZNF558-205ENST00000597304 SPON1Q9HCB6 807 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 ATAD3AQ9NVI7 634 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 PSME2Q9UL46 239 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 TMED5Q9Y3A6 229 aa12.61□□□□□ -0.39
ZNF558-205ENST00000597304 H0YAE9 185 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 SOCS7O14512 581 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 AURKAO14965 403 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 APBA3O96018 575 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ALBP02768 609 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 IMPDH1P20839 514 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ADARB1P78563 741 aaKnown RBP12.6□□□□□ -0.39
ZNF558-205ENST00000597304 TUBA3CQ13748 450 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ACAP2Q15057 778 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ZBTB6Q15916 424 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 SPATS1Q496A3 300 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 KIAA0930Q6ICG6 404 aaPredicted RBP12.6□□□□□ -0.39
ZNF558-205ENST00000597304 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 KLHDC8BQ8IXV7 354 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 TBC1D21Q8IYX1 336 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 SFRP1Q8N474 314 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 APPL2Q8NEU8 664 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
ZNF558-205ENST00000597304 SNX19Q92543 992 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 TAMM41Q96BW9 452 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 BEGAINQ9BUH8 593 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 YIPF2Q9BWQ6 316 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 SPATC1LQ9H0A9 340 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 NANOGQ9H9S0 305 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ANAPC2Q9UJX6 822 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 FBXW11Q9UKB1 542 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 FAM32AQ9Y421 112 aaKnown RBP12.6□□□□□ -0.39
ZNF558-205ENST00000597304 C9JVG2 144 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 CLDN5O00501 218 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 CACNG3O60359 315 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ANXA9O76027 345 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 BEST1O76090 585 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 LDLRP01130 860 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 PGK2P07205 417 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 TXNP10599 105 aaKnown RBP12.6□□□□□ -0.39
ZNF558-205ENST00000597304 NPR3P17342 541 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ELK4P28324 431 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 RPS3AP61247 264 aaKnown RBP12.6□□□□□ -0.39
ZNF558-205ENST00000597304 FOXM1Q08050 763 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 BFSP2Q13515 415 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 SNX17Q15036 470 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ZNF678Q5SXM1 525 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 IFNEQ86WN2 208 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 CLYBLQ8N0X4 340 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 TMCO5AQ8N6Q1 288 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 B3GALNT2Q8NCR0 500 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 BPIFB6Q8NFQ5 453 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 DPF3Q92784 378 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 TSPAN17Q96FV3 270 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 RAD21L1Q9H4I0 556 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ALG2Q9H553 416 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 RNF19AQ9NV58 838 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 DAPK2Q9UIK4 370 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 ZNF236Q9UL36 1845 aa12.6□□□□□ -0.39
ZNF558-205ENST00000597304 CNOT3O75175 753 aaKnown RBP12.59□□□□□ -0.39
ZNF558-205ENST00000597304 CAPN15O75808 1086 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 CHRM3P20309 590 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 GEN1Q17RS7 908 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 NEPROQ6NW34 567 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 KIAA0408Q6ZU52 694 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 CCDC117Q8IWD4 279 aaPredicted RBP12.59□□□□□ -0.39
ZNF558-205ENST00000597304 LEMD2Q8NC56 503 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 OSCP1Q8WVF1 389 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 KCTD13Q8WZ19 329 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 L3HYPDHQ96EM0 354 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 ZNF560Q96MR9 790 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 TRIM54Q9BYV2 358 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 ING2Q9H160 280 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 TREX1Q9NSU2 369 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 DDIT4Q9NX09 232 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 GIN1Q9NXP7 522 aa12.59□□□□□ -0.39
ZNF558-205ENST00000597304 PCDHA9Q9Y5H5 950 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms