RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 PTGES3LE9PB15 166 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SOCS6O14544 535 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 KIAA0355O15063 1070 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 EIF3DO15371 548 aaKnown RBP eCLIP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ATP9AO75110 1047 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ZNF821O75541 412 aaPredicted RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 RASAL1O95294 804 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ASS1P00966 412 aaKnown RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SOD2P04179 222 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 A1BGP04217 495 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PDE6AP16499 860 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ZNF18P17022 549 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ITPKAP23677 461 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PTPN4P29074 926 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 IGFALSP35858 605 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CHRNA7P36544 502 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PTPN9P43378 593 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 LMAN1P49257 510 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CCT3P49368 545 aaKnown RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 BMXP51813 675 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CDH6P55285 790 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 LCP2Q13094 533 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PMS2P3Q13401 168 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 MAMLD1Q13495 774 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 DYRK1AQ13627 763 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CAPSQ13938 189 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 LRRC32Q14392 662 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CAPRIN1Q14444 709 aaKnown RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 TARBP2Q15633 366 aaKnown RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PDCD4Q53EL6 469 aaKnown RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ERMARDQ5T6L9 678 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 RIPPLY2Q5TAB7 128 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 GARNL3Q5VVW2 1013 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 NAA35Q5VZE5 725 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PLA2G4FQ68DD2 849 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 KRT40Q6A162 431 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 KIAA1841Q6NSI8 718 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 KIAA1161Q6NSJ0 714 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SHC4Q6S5L8 630 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 LAYNQ6UX15 382 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 HTR3DQ70Z44 454 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 EFL1Q7Z2Z2 1120 aaKnown RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 TMPRSS9Q7Z410 1059 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PXKQ7Z7A4 578 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ADGRA1Q86SQ6 560 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 FAM131BQ86XD5 332 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 COL23A1Q86Y22 540 aaPredicted RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 RIOX2Q8IUF8 465 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SCUBE1Q8IWY4 988 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CMIPQ8IY22 773 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 DIS3L2Q8IYB7 885 aaKnown RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SLC38A6Q8IZM9 456 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CLEC4FQ8N1N0 589 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 OR10H5Q8NGA6 315 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 FAM71BQ8TC56 605 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 WDR60Q8WVS4 1066 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CAPSLQ8WWF8 208 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SLC44A1Q8WWI5 657 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PPP1R14AQ96A00 147 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CCDC127Q96BQ5 260 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ATG4CQ96DT6 458 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 TMEM169Q96HH4 297 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 MMS19Q96T76 1030 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 MIPEPQ99797 713 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 LRFN3Q9BTN0 628 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CCDC28BQ9BUN5 200 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 LRRC3Q9BY71 257 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 FRMD8Q9BZ67 464 aaPredicted RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 TRIM15Q9C019 465 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 BTBD1Q9H0C5 482 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 EPN3Q9H201 632 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 OSGEPL1Q9H4B0 414 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 RIBC2Q9H4K1 309 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 EXO5Q9H790 373 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 LRRC40Q9H9A6 602 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 KCNK12Q9HB15 430 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SP110Q9HB58 689 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ZNF287Q9HBT7 754 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PAK6Q9NQU5 681 aaPredicted RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CYP26B1Q9NR63 512 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ZDHHC18Q9NUE0 388 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 TBC1D13Q9NVG8 400 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ZSCAN32Q9NX65 697 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 KCNN3Q9UGI6 736 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ADAM21Q9UKJ8 722 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SPATA2Q9UM82 520 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PACSIN2Q9UNF0 486 aaPredicted RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ENTPD4Q9Y227 616 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 CHKBQ9Y259 395 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 ERGIC3Q9Y282 383 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 STXBP5LQ9Y2K9 1186 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 AP3M1Q9Y2T2 418 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SAMHD1Q9Y3Z3 626 aaKnown RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 PCDHA3Q9Y5H8 950 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SRPRBQ9Y5M8 271 aaKnown RBP5.54□□□□□ -1.52
CAPN3-211ENST00000562199 SNX13Q9Y5W8 968 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 LRP6O75581 1613 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 MST1RQ04912 1400 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 MYH7P12883 1935 aa5.54□□□□□ -1.52
CAPN3-211ENST00000562199 MYO5AQ9Y4I1 1855 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms