RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 PILRBQ9UKJ0 227 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 VPS13AQ96RL7 3174 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 PLXNA2O75051 1894 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 ERI2A8K979 691 aaKnown RBP12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 USP12O75317 370 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 ECEL1O95672 775 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 FGF1P05230 155 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 BRD3Q15059 726 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 MAP9Q49MG5 647 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 HSD11B1LQ7Z5J1 315 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 SLC25A41Q8N5S1 370 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 RUNDC3BQ96NL0 473 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 LENG8Q96PV6 779 aaPredicted RBP12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 TBL1YQ9BQ87 522 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 CARD6Q9BX69 1037 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 LRRC40Q9H9A6 602 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 DMTF1Q9Y222 760 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 TRPM6Q9BX84 2022 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 MEI4A8MW99 385 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 PSMD11O00231 422 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 RAD51BO15315 384 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 PAK4O96013 591 aaPredicted RBP12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 C1SP09871 688 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 PIRTP0C851 137 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 IVDP26440 423 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 NUDT1P36639 197 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 STC1P52823 247 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 C2orf54Q08AI8 447 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 GPS1Q13098 491 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 PTK6Q13882 451 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 WDR45BQ5MNZ6 344 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 LRRC66Q68CR7 880 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 TECPR1Q7Z6L1 1165 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 TTC30BQ8N4P2 665 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 TMEM145Q8NBT3 493 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 HNRNPLLQ8WVV9 542 aaKnown RBP12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 CENPTQ96BT3 561 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 KRT12Q99456 494 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 FSD1LQ9BXM9 530 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 EIF2B3Q9NR50 452 aaKnown RBP12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 COQ6Q9Y2Z9 468 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 PCDHGA5Q9Y5G8 931 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 USP34Q70CQ2 3546 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 TCRBV7S3A2A0A539 114 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 GOLGA6CA6NDK9 693 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 GOLGA6BA6NDN3 693 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 AURKAO14965 403 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 SLC31A1O15431 190 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 TM7SF2O76062 418 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 CLDN7O95471 211 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 GAS8O95995 478 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 LMNAP02545 664 aaKnown RBP12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 GOLGA6DP0CG33 693 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 ZNF30P17039 623 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 NFKBIAP25963 317 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 GRIA1P42261 906 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 VPS41P49754 854 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 SETMARQ53H47 684 aaPredicted RBP12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 PLA2G2CQ5R387 149 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 SYCP2LQ5T4T6 812 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 CCDC70Q6NSX1 233 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 RFLNAQ6ZTI6 216 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 LYSMD3Q7Z3D4 306 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 TMC3Q7Z5M5 1100 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 SYT12Q8IV01 421 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 TP53I13Q8NBR0 393 aaPredicted RBP12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 GOLGA6AQ9NYA3 693 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 RAB23Q9ULC3 237 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 ZNF711Q9Y462 761 aa12.73□□□□□ -0.37
RPUSD4-208ENST00000533628 A0A1W2PR77 199 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 RECQL5O94762 991 aaPredicted RBP12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 RETP07949 1114 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 ELFN1P0C7U0 828 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 TPSB2P20231 275 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 DR1Q01658 176 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 CKAP4Q07065 602 aaKnown RBP12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 DHX34Q14147 1143 aaKnown RBP12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 TPSAB1Q15661 275 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 WSCD2Q2TBF2 565 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 NAPEPLDQ6IQ20 393 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 SYDE1Q6ZW31 735 aaPredicted RBP12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 CYP2U1Q7Z449 544 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 JAMLQ86YT9 394 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 RAVER1Q8IY67 606 aaKnown RBP12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 CPT1BQ92523 772 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 SNX19Q92543 992 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 SLC6A18Q96N87 628 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 SRPK1Q96SB4 655 aaKnown RBP12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 PARD6BQ9BYG5 372 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 TM9SF3Q9HD45 589 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 CASS4Q9NQ75 786 aa12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 ATXN2Q99700 1313 aaKnown RBP12.72□□□□□ -0.37
RPUSD4-208ENST00000533628 C1orf232A0A0U1RR37 186 aa12.71□□□□□ -0.37
RPUSD4-208ENST00000533628 PRAMEF26H0Y7S4 382 aa12.71□□□□□ -0.37
RPUSD4-208ENST00000533628 TTI1O43156 1089 aa12.71□□□□□ -0.37
RPUSD4-208ENST00000533628 WNT1P04628 370 aa12.71□□□□□ -0.37
RPUSD4-208ENST00000533628 APRTP07741 180 aa12.71□□□□□ -0.37
RPUSD4-208ENST00000533628 HNRNPA2B1P22626 353 aaKnown RBP12.71□□□□□ -0.37
RPUSD4-208ENST00000533628 HOXD12P35452 270 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms