RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 OR7D4Q8NG98 312 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 OR52K2Q8NGK3 314 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 OR2A12Q8NGT7 310 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 WDR36Q8NI36 951 aaKnown RBP8.38□□□□□ -1.07
SDHC-208ENST00000513009 WDR48Q8TAF3 677 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 ZNF564Q8TBZ8 553 aaPredicted RBP8.38□□□□□ -1.07
SDHC-208ENST00000513009 KLK6Q92876 244 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 ARHGEF2Q92974 986 aaKnown RBP8.38□□□□□ -1.07
SDHC-208ENST00000513009 ISG20Q96AZ6 181 aaKnown RBP8.38□□□□□ -1.07
SDHC-208ENST00000513009 ARRDC3Q96B67 414 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 ARHGEF26Q96DR7 871 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 CALR3Q96L12 384 aaKnown RBP8.38□□□□□ -1.07
SDHC-208ENST00000513009 BMFQ96LC9 184 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 CCNL2Q96S94 520 aaPredicted RBP8.38□□□□□ -1.07
SDHC-208ENST00000513009 SYT11Q9BT88 431 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 OSBPL1AQ9BXW6 950 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 HDAC8Q9BY41 377 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 TSPAN10Q9H1Z9 355 aaPredicted RBP8.38□□□□□ -1.07
SDHC-208ENST00000513009 CAAP1Q9H8G2 361 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 SP110Q9HB58 689 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 FZD3Q9NPG1 666 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 DNAJC28Q9NX36 388 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 INTUQ9ULD6 942 aa8.38□□□□□ -1.07
SDHC-208ENST00000513009 ZFR2Q9UPR6 939 aaKnown RBP8.38□□□□□ -1.07
SDHC-208ENST00000513009 HEMK1Q9Y5R4 338 aaPredicted RBP8.38□□□□□ -1.07
SDHC-208ENST00000513009 PTPN13Q12923 2485 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 CCDC187A0A096LP49 1063 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 TCRBV5S1A1TA0A578 114 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 SERTM1A2A2V5 107 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 TMEM110-MUSTN1A8MSY1 372 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 WASH4PA8MWX3 477 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 DFFAO00273 331 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 KRIT1O00522 736 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 SNAP91O60641 907 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 PALMO75781 387 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 PCDH8O95206 1070 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 ITGA2BP08514 1039 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 EPXP11678 715 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 KRT10P13645 584 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 CETN2P41208 172 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 MAGEA1P43355 309 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 RENBPP51606 427 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 RHOAP61586 193 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 NFATC3Q12968 1075 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 PDK2Q15119 407 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 INO80DQ53TQ3 878 aaPredicted RBP8.37□□□□□ -1.07
SDHC-208ENST00000513009 ZNF542PQ5EBM4 170 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 SEL1L3Q68CR1 1132 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 KIAA1161Q6NSJ0 714 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 GUSBP11Q6P575 273 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 C22orf39Q6P5X5 142 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 LINC00114Q6XXX2 140 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 RFX8Q6ZV50 586 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 ERN2Q76MJ5 926 aaKnown RBP8.37□□□□□ -1.07
SDHC-208ENST00000513009 EFL1Q7Z2Z2 1120 aaKnown RBP8.37□□□□□ -1.07
SDHC-208ENST00000513009 PTAR1Q7Z6K3 402 aaPredicted RBP8.37□□□□□ -1.07
SDHC-208ENST00000513009 ZSCAN30Q86W11 494 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 PARGQ86W56 976 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 TMTC1Q8IUR5 882 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 LRRC49Q8IUZ0 686 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 ZNF683Q8IZ20 524 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 UMODL1-AS1Q8N2C9 162 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 PYROXD2Q8N2H3 581 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 EXD3Q8N9H8 876 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.37□□□□□ -1.07
SDHC-208ENST00000513009 TEKT4Q8WW24 435 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 NAT6Q93015 286 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 MRFAP1L1Q96HT8 127 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 FEM1CQ96JP0 617 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 BTBD6Q96KE9 485 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 GDAP1L1Q96MZ0 367 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 ZNF830Q96NB3 372 aaPredicted RBP8.37□□□□□ -1.07
SDHC-208ENST00000513009 SNRNP25Q9BV90 132 aaKnown RBP8.37□□□□□ -1.07
SDHC-208ENST00000513009 ANLNQ9NQW6 1124 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 STARD5Q9NSY2 213 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 UBA2Q9UBT2 640 aaPredicted RBP8.37□□□□□ -1.07
SDHC-208ENST00000513009 ACSL6Q9UKU0 697 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.37□□□□□ -1.07
SDHC-208ENST00000513009 PCDHGA7Q9Y5G6 932 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 SCN8AQ9UQD0 1980 aa8.37□□□□□ -1.07
SDHC-208ENST00000513009 DOCK4Q8N1I0 1966 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 CPED1A4D0V7 1026 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 PMS2P1A4D2B8 440 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 POM121BA6NF01 834 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 RASA4BC9J798 803 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 FAM72CH0Y354 149 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 AQP9O43315 295 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 RASA4O43374 803 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 LRCH4O75427 683 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 TNFSF15O95150 251 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 GSRP00390 522 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 MT-CO1P00395 513 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 ERCC2P18074 760 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 GJC1P36383 396 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 SLC1A1P43005 524 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 RABIFP47224 123 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 IRAK1P51617 712 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 NEK3P51956 506 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 PDX1P52945 283 aa8.36□□□□□ -1.07
SDHC-208ENST00000513009 CDH6P55285 790 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms