RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 EXOC3L4Q17RC7 722 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 FAM171BQ6P995 826 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 C1orf228Q6PIY5 440 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 DENND5BQ6ZUT9 1274 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 ACOT1Q86TX2 421 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 FMNL3Q8IVF7 1028 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 ARHGAP18Q8N392 663 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 RNF10Q8N5U6 811 aaKnown RBP4.86□□□□□ -1.63
CSTF1-205ENST00000490539 C1orf131Q8NDD1 294 aaKnown RBP4.86□□□□□ -1.63
CSTF1-205ENST00000490539 SPATA4Q8NEY3 305 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 OR10T2Q8NGX3 314 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 CSGALNACT1Q8TDX6 532 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 TAS1R2Q8TE23 839 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 DEPDC1BQ8WUY9 529 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 SMARCD2Q92925 531 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 FATE1Q969F0 183 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 MYLPFQ96A32 169 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 CYFIP2Q96F07 1278 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 PCED1BQ96HM7 432 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 SPATA17Q96L03 361 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 CCDC42Q96M95 316 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 OSBPL9Q96SU4 736 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 CPPED1Q9BRF8 314 aaPredicted RBP4.86□□□□□ -1.63
CSTF1-205ENST00000490539 TRIM62Q9BVG3 475 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 TRMT61BQ9BVS5 477 aaKnown RBP4.86□□□□□ -1.63
CSTF1-205ENST00000490539 CAPS2Q9BXY5 557 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 BRD9Q9H8M2 597 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 COMMD8Q9NX08 183 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 GOLGA6AQ9NYA3 693 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 KLHL42Q9P2K6 505 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 DNMT3BQ9UBC3 853 aaKnown RBP4.86□□□□□ -1.63
CSTF1-205ENST00000490539 MUTYHQ9UIF7 546 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 EDARQ9UNE0 448 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 SIK3Q9Y2K2 1263 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 CEP83Q9Y592 693 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 PTPRJQ12913 1337 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 TEX15Q9BXT5 2789 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 NBEAQ8NFP9 2946 aa4.86□□□□□ -1.63
CSTF1-205ENST00000490539 SCN1AP35498 2009 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 TRAV19A0A0A6YYK7 116 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 MACROD2A1Z1Q3 448 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 MYBPHLA2RUH7 354 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 GTPBP10A4D1E9 387 aaKnown RBP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 GRID2IPA4D2P6 1211 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 SRRM3A6NNA2 597 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 VGLL3A8MV65 326 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 EBAG9O00559 213 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 EIF3HO15372 352 aaKnown RBP eCLIP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 HSF2BPO75031 334 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 VNN1O95497 513 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 S100BP04271 92 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 CCDC172P0C7W6 258 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 RALAP11233 206 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 CD19P15391 556 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 PSMC3P17980 439 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 LMO2P25791 158 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 YWHAQP27348 245 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 USP8P40818 1118 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 CASRP41180 1078 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 KLK7P49862 253 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 NDST1P52848 882 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 SLC5A3P53794 718 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 CDH8P55286 799 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 GCNT1Q02742 428 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 SIGLEC14Q08ET2 396 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 INCA1Q0VD86 236 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 ASTE1Q2TB18 679 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 EMC10Q5UCC4 262 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 ICE2Q659A1 982 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 DDX42Q86XP3 938 aaKnown RBP eCLIP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 TMPRSS6Q8IU80 811 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 ZC3H3Q8IXZ2 948 aaKnown RBP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 NUP93Q8N1F7 819 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 CRYBG2Q8N1P7 616 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 MREGQ8N565 214 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 CELF5Q8N6W0 485 aaKnown RBP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 EIF1ADQ8N9N8 165 aaKnown RBP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 MDGA1Q8NFP4 955 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 CCDC26Q8TAB7 109 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 SLC2A14Q8TDB8 520 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 SNX33Q8WV41 574 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 KBTBD7Q8WVZ9 684 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 ING5Q8WYH8 240 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 OVCA2Q8WZ82 227 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 SYN2Q92777 582 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 SLC35C1Q96A29 364 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 ELSPBP1Q96BH3 223 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 MCRS1Q96EZ8 462 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 C8orf48Q96LL4 319 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 RUFY1Q96T51 708 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 NELL2Q99435 816 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 MRPL45Q9BRJ2 306 aaKnown RBP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 ZNF747Q9BV97 191 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 NDST4Q9H3R1 872 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 TASP1Q9H6P5 420 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 SMYD3Q9H7B4 428 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 ZNF703Q9H7S9 590 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-205ENST00000490539 YY1AP1Q9H869 796 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 KIF9Q9HAQ2 790 aa4.85□□□□□ -1.63
CSTF1-205ENST00000490539 LRRC4Q9HBW1 653 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms