RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 DDIT3P35638 169 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 USP8P40818 1118 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 IL15P40933 162 aaPredicted RBP3.79□□□□□ -1.8
GCFC2-209ENST00000486016 TMPOP42166 694 aaKnown RBP3.79□□□□□ -1.8
GCFC2-209ENST00000486016 CLCNKAP51800 687 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 RAD23BP54727 409 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 HNRNPH2P55795 449 aaKnown RBP3.79□□□□□ -1.8
GCFC2-209ENST00000486016 SREBF2Q12772 1141 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 ITGADQ13349 1161 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 PPIGQ13427 754 aaKnown RBP eCLIP3.79□□□□□ -1.8
GCFC2-209ENST00000486016 EFR3AQ14156 821 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 NAA25Q14CX7 972 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 EIF2S3LQ2VIR3 472 aaKnown RBP3.79□□□□□ -1.8
GCFC2-209ENST00000486016 STXBP5Q5T5C0 1151 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 SERTAD4-AS1Q5TG53 156 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 IRAK1BP1Q5VVH5 260 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 TRNP1Q6NT89 227 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 TAOK1Q7L7X3 1001 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 MYCT1Q8N699 235 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 OR2AK2Q8NG84 335 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 FBXL8Q96CD0 374 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 PAGR1Q9BTK6 254 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 LRRC1Q9BTT6 524 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 NOD2Q9HC29 1040 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 MMP25Q9NPA2 562 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 SNTG1Q9NSN8 517 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 PADI1Q9ULC6 663 aa3.79□□□□□ -1.8
GCFC2-209ENST00000486016 TP53BP1Q12888 1972 aaPredicted RBP3.79□□□□□ -1.8
GCFC2-209ENST00000486016 CTAGE9A4FU28 777 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 CTAGE8P0CG41 777 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 MYOD1P15172 320 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 NR1D1P20393 614 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 SHMT1P34896 483 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 EFNA5P52803 228 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 PMP22Q01453 160 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 ANKRD1Q15327 319 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 CTF1Q16619 201 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 C2orf68Q2NKX9 166 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 ADCK5Q3MIX3 580 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 ARHGAP11AQ6P4F7 1023 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 ZNF852Q6ZMS4 543 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 LINGO2Q7L985 606 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 CTAGE4Q8IX94 777 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 SLC35F3Q8IY50 421 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 CCDC146Q8IYE0 955 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 PLD5Q8N7P1 536 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 MAPK1IP1LQ8NDC0 245 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 BEST2Q8NFU1 509 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 EYA3Q99504 573 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 BARHL1Q9BZE3 327 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 KIAA1456Q9P272 454 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 PEMTQ9UBM1 199 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 RCOR1Q9UKL0 485 aa3.78□□□□□ -1.8
GCFC2-209ENST00000486016 TAF4O00268 1085 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 TUBBP07437 444 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 RNF224P0DH78 156 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 ALDH4A1P30038 563 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 CORO1AP31146 461 aaKnown RBP3.77□□□□□ -1.81
GCFC2-209ENST00000486016 TUBB4BP68371 445 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 WDR45BQ5MNZ6 344 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 RGMBQ6NW40 437 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 LCTLQ6UWM7 567 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 SLC36A4Q6YBV0 504 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 ASB18Q6ZVZ8 466 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 GPAT4Q86UL3 456 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 RNF113BQ8IZP6 322 aaKnown RBP3.77□□□□□ -1.81
GCFC2-209ENST00000486016 COG8Q96MW5 612 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 ZNF570Q96NI8 536 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 REEP2Q9BRK0 252 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 NUF2Q9BZD4 464 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 BABAM1Q9NWV8 329 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 AMDHD2Q9Y303 409 aa3.77□□□□□ -1.81
GCFC2-209ENST00000486016 LSM4Q9Y4Z0 139 aaKnown RBP3.77□□□□□ -1.81
GCFC2-209ENST00000486016 TMEM202A6NGA9 273 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 PRSS1P07477 247 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 PATE4P0C8F1 98 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 KRT5P13647 590 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 DCTP40126 519 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 TAF5Q15542 800 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 CCNYL2Q5T2Q4 361 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 FBXO46Q6PJ61 603 aaPredicted RBP3.76□□□□□ -1.81
GCFC2-209ENST00000486016 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 TMTC1Q8IUR5 882 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 DHX40Q8IX18 779 aaKnown RBP3.76□□□□□ -1.81
GCFC2-209ENST00000486016 DBF4BQ8NFT6 615 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 RUFY2Q8WXA3 655 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 STAMQ92783 540 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 ELP4Q96EB1 424 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 ZNF583Q96ND8 569 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 PCYT2Q99447 389 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 MAGEE1Q9HCI5 957 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 ALKBH4Q9NXW9 302 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 CTNNAL1Q9UBT7 734 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 FBXO9Q9UK97 447 aaPredicted RBP3.76□□□□□ -1.81
GCFC2-209ENST00000486016 DLGAP4Q9Y2H0 992 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 OR2W1Q9Y3N9 320 aa3.76□□□□□ -1.81
GCFC2-209ENST00000486016 CACNA1FO60840 1977 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 IGKV3D-15A0A087WSY6 115 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 GOLGA6L10A0A0M3HER8 536 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 TEX22C9J3V5 150 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms