RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 SLC35F3Q8IY50 421 aa4.19□□□□□ -1.74
SCAF11-207ENST00000484275 CCDC146Q8IYE0 955 aa4.19□□□□□ -1.74
SCAF11-207ENST00000484275 METTL27Q8N6F8 245 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-207ENST00000484275 LSM14AQ8ND56 463 aaKnown RBP4.19□□□□□ -1.74
SCAF11-207ENST00000484275 KLHDC9Q8NEP7 349 aa4.19□□□□□ -1.74
SCAF11-207ENST00000484275 ZNF570Q96NI8 536 aa4.19□□□□□ -1.74
SCAF11-207ENST00000484275 PHF7Q9BWX1 381 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-207ENST00000484275 HCFC1R1Q9NWW0 138 aa4.19□□□□□ -1.74
SCAF11-207ENST00000484275 PEMTQ9UBM1 199 aa4.19□□□□□ -1.74
SCAF11-207ENST00000484275 IGKV3D-15A0A087WSY6 115 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 AKR1B15C9JRZ8 316 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-207ENST00000484275 IFNL4K9M1U5 179 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 BCAT2O15382 392 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-207ENST00000484275 PRSS1P07477 247 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 MMP2P08253 660 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 CORO1AP31146 461 aaKnown RBP4.18□□□□□ -1.74
SCAF11-207ENST00000484275 CLCNKAP51800 687 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 FBXO46Q6PJ61 603 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-207ENST00000484275 DSELQ8IZU8 1212 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 SPEM1Q8N4L4 309 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 PLD5Q8N7P1 536 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 RUFY2Q8WXA3 655 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 PPM1EQ8WY54 764 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 FBXL8Q96CD0 374 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 COG8Q96MW5 612 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 SIN3AQ96ST3 1273 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 PCYT2Q99447 389 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 CD180Q99467 661 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 EYA3Q99504 573 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 BARHL1Q9BZE3 327 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 TAOK3Q9H2K8 898 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 NOD2Q9HC29 1040 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 BABAM1Q9NWV8 329 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 ALKBH4Q9NXW9 302 aa4.18□□□□□ -1.74
SCAF11-207ENST00000484275 ZNF500O60304 480 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-207ENST00000484275 PATE4P0C8F1 98 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 NR1D1P20393 614 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 USP8P40818 1118 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 HNRNPH2P55795 449 aaKnown RBP4.17□□□□□ -1.74
SCAF11-207ENST00000484275 PMP22Q01453 160 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 TBL3Q12788 808 aaKnown RBP4.17□□□□□ -1.74
SCAF11-207ENST00000484275 C2orf68Q2NKX9 166 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 ADCK5Q3MIX3 580 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 HIST2H2BDQ6DRA6 164 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 LCTLQ6UWM7 567 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 ZNF497Q6ZNH5 498 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 MAGEC3Q8TD91 643 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 LGALS12Q96DT0 336 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 MAGEE1Q9HCI5 957 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 MMP25Q9NPA2 562 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 KIAA1456Q9P272 454 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 AMDHD2Q9Y303 409 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 OR2W1Q9Y3N9 320 aa4.17□□□□□ -1.74
SCAF11-207ENST00000484275 EXTL3O43909 919 aa4.16□□□□□ -1.74
SCAF11-207ENST00000484275 HEXAP06865 529 aa4.16□□□□□ -1.74
SCAF11-207ENST00000484275 ISL1P61371 349 aa4.16□□□□□ -1.74
SCAF11-207ENST00000484275 PPIGQ13427 754 aaKnown RBP eCLIP4.16□□□□□ -1.742e-7■□□□□ 9.1
SCAF11-207ENST00000484275 GPATCH4Q5T3I0 446 aaKnown RBP4.16□□□□□ -1.74
SCAF11-207ENST00000484275 ZNF772Q68DY9 489 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-207ENST00000484275 TRNP1Q6NT89 227 aa4.16□□□□□ -1.74
SCAF11-207ENST00000484275 ASB18Q6ZVZ8 466 aa4.16□□□□□ -1.74
SCAF11-207ENST00000484275 KCTD8Q6ZWB6 473 aa4.16□□□□□ -1.74
SCAF11-207ENST00000484275 C2CD5Q86YS7 1000 aa4.16□□□□□ -1.74
SCAF11-207ENST00000484275 DHX40Q8IX18 779 aaKnown RBP4.16□□□□□ -1.74
SCAF11-207ENST00000484275 RNF113BQ8IZP6 322 aaKnown RBP4.16□□□□□ -1.74
SCAF11-207ENST00000484275 BEST2Q8NFU1 509 aa4.16□□□□□ -1.74
SCAF11-207ENST00000484275 CMKLR1Q99788 373 aa4.16□□□□□ -1.74
SCAF11-207ENST00000484275 LRRC1Q9BTT6 524 aa4.16□□□□□ -1.74
SCAF11-207ENST00000484275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.16□□□□□ -1.74
SCAF11-207ENST00000484275 LSM4Q9Y4Z0 139 aaKnown RBP4.16□□□□□ -1.74
SCAF11-207ENST00000484275 IGKV3D-20A0A0C4DH25 116 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 TUBBP07437 444 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 PAX1P15863 534 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 MAOAP21397 527 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 SHMT1P34896 483 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 TUBB4BP68371 445 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 UBE4AQ14139 1066 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 MORC3Q14149 939 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 ANKRD1Q15327 319 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 TAF11Q15544 211 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 ZNF876PQ49A33 203 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 LINGO2Q7L985 606 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 ADGRG6Q86SQ4 1221 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 USP38Q8NB14 1042 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 MAPK1IP1LQ8NDC0 245 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 OR10V1Q8NGI7 309 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 ELP4Q96EB1 424 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 C17orf77Q96MU5 243 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 HEMGNQ9BXL5 484 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 TTYH1Q9H313 450 aaPredicted RBP4.15□□□□□ -1.75
SCAF11-207ENST00000484275 IL1RAPL1Q9NZN1 696 aa4.15□□□□□ -1.75
SCAF11-207ENST00000484275 FBXO9Q9UK97 447 aaPredicted RBP4.15□□□□□ -1.75
SCAF11-207ENST00000484275 FAF1Q9UNN5 650 aaPredicted RBP4.15□□□□□ -1.75
SCAF11-207ENST00000484275 COL2A1P02458 1487 aaPredicted RBP4.14□□□□□ -1.75
SCAF11-207ENST00000484275 GOLGA6L9A6NEM1 432 aa4.14□□□□□ -1.75
SCAF11-207ENST00000484275 TMEM202A6NGA9 273 aa4.14□□□□□ -1.75
SCAF11-207ENST00000484275 SERINC4A6NH21 518 aa4.14□□□□□ -1.75
SCAF11-207ENST00000484275 DVL1O14640 695 aa4.14□□□□□ -1.75
SCAF11-207ENST00000484275 GNL1P36915 607 aaPredicted RBP4.14□□□□□ -1.75
SCAF11-207ENST00000484275 DVL1P1P54792 670 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms