RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 C21orf59P57076 290 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 SPARCL1Q14515 664 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 LRRC14Q15048 493 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 AGERQ15109 404 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 SLC1A5Q15758 541 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 CDKN3Q16667 212 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 CYP1B1Q16678 543 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 KIF19Q2TAC6 998 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 SIRPB2Q5JXA9 342 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 KCTD11Q693B1 232 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 CCDC70Q6NSX1 233 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 KYAT3Q6YP21 454 aaKnown RBP13.96□□□□□ -0.17
CPNE1-206ENST00000412056 RFLNAQ6ZTI6 216 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 NYAP1Q6ZVC0 841 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 LYSMD3Q7Z3D4 306 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 PTAR1Q7Z6K3 402 aaPredicted RBP13.96□□□□□ -0.17
CPNE1-206ENST00000412056 ABI3BPQ7Z7G0 1075 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 CBARPQ8N350 705 aaPredicted RBP13.96□□□□□ -0.17
CPNE1-206ENST00000412056 CCDC89Q8N998 374 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 MAGOHBQ96A72 148 aaKnown RBP13.96□□□□□ -0.17
CPNE1-206ENST00000412056 NUS1Q96E22 293 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 BMFQ96LC9 184 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 C16orf45Q96MC5 204 aaPredicted RBP13.96□□□□□ -0.17
CPNE1-206ENST00000412056 GTPBP2Q9BX10 602 aaKnown RBP13.96□□□□□ -0.17
CPNE1-206ENST00000412056 HOMER3Q9NSC5 361 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 SHOC2Q9UQ13 582 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 ANKRD6Q9Y2G4 727 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 AAR2Q9Y312 384 aaKnown RBP13.96□□□□□ -0.17
CPNE1-206ENST00000412056 ZNF711Q9Y462 761 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 SPO11Q9Y5K1 396 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 SNX11Q9Y5W9 270 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 HS3ST3A1Q9Y663 406 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 GVINP1Q7Z2Y8 2422 aa13.96□□□□□ -0.17
CPNE1-206ENST00000412056 PLXNB3Q9ULL4 1909 aa13.96□□□□□ -0.18
CPNE1-206ENST00000412056 FPGTO14772 594 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 PHF2O75151 1096 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 USP12O75317 370 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 SLC4A1P02730 911 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 FGF1P05230 155 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 SYPP08247 313 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 THEGLP0DJG4 465 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 HLA-DPA1P20036 260 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-206ENST00000412056 CASQ1P31415 396 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 RPL22P35268 128 aaKnown RBP13.95□□□□□ -0.18
CPNE1-206ENST00000412056 ACTN2P35609 894 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 COILP38432 576 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-206ENST00000412056 ETV3P41162 512 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 CTSKP43235 329 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 TNNT3P45378 269 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-206ENST00000412056 NXPH1P58417 271 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 PTSQ03393 145 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 Q6ZSR6 202 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 Q6ZVL8 140 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 GSTA5Q7RTV2 222 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 TECPR1Q7Z6L1 1165 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 IQCHQ86VS3 1027 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 SPATS2Q86XZ4 545 aaKnown RBP13.95□□□□□ -0.18
CPNE1-206ENST00000412056 CREG2Q8IUH2 290 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 PELI3Q8N2H9 469 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 MINDY1Q8N5J2 469 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 PLA2G15Q8NCC3 412 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 DTD2Q96FN9 168 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 KLHDC7BQ96G42 594 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 PPP1R2P1Q96PQ5 205 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 TBL1YQ9BQ87 522 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 ETNK1Q9HBU6 452 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 PAK5Q9P286 719 aa13.95□□□□□ -0.18
CPNE1-206ENST00000412056 GOLGA6L10A0A0M3HER8 536 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-206ENST00000412056 GOLGA6CA6NDK9 693 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 GOLGA6BA6NDN3 693 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 TLR4O00206 839 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 PDE2AO00408 941 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-206ENST00000412056 CDX4O14627 284 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-206ENST00000412056 AURKAO14965 403 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 FOXD2O60548 495 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-206ENST00000412056 GOLGA6DP0CG33 693 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 FDFT1P37268 417 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 PFN3P60673 137 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 LMNB2Q03252 620 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 OVGP1Q12889 678 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 TRIP13Q15645 432 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-206ENST00000412056 TPRG1LQ5T0D9 272 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 CCDC137Q6PK04 289 aaKnown RBP13.94□□□□□ -0.18
CPNE1-206ENST00000412056 RANBP10Q6VN20 620 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 SLC22A18ASQ8N1D0 253 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 PDCD7Q8N8D1 485 aaKnown RBP13.94□□□□□ -0.18
CPNE1-206ENST00000412056 SKA1Q96BD8 255 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 EID2BQ96D98 161 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 ZDHHC5Q9C0B5 715 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 IL21RQ9HBE5 538 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 MAGEE1Q9HCI5 957 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 GPR27Q9NS67 375 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 GOLGA6AQ9NYA3 693 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 CD84Q9UIB8 345 aa13.94□□□□□ -0.18
CPNE1-206ENST00000412056 ZFC3H1O60293 1989 aaKnown RBP13.93□□□□□ -0.18
CPNE1-206ENST00000412056 K7ESM1 405 aa13.93□□□□□ -0.18
CPNE1-206ENST00000412056 PSMD3O43242 534 aa13.93□□□□□ -0.18
CPNE1-206ENST00000412056 AP2A1O95782 977 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms