RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CRNKL1Q9BZJ0 848 aaKnown RBP4.6□□□□□ -1.67
CLK1-203ENST00000409769 TM6SF1Q9BZW5 370 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 CHODLQ9H9P2 273 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 ZNF304Q9HCX3 659 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 PNRC2Q9NPJ4 139 aaKnown RBP4.6□□□□□ -1.67
CLK1-203ENST00000409769 DDX4Q9NQI0 724 aaKnown RBP4.6□□□□□ -1.67
CLK1-203ENST00000409769 THAP1Q9NVV9 213 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 ZDHHC7Q9NXF8 308 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 CTNNA3Q9UI47 895 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 CD207Q9UJ71 328 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 SLC25A13Q9UJS0 675 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 ANAPC4Q9UJX5 808 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 FBXO4Q9UKT5 387 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 OSGIN2Q9Y236 505 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 GPR52Q9Y2T5 361 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 FLT1P17948 1338 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 A0A1W2PPC1 479 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 A6NNC1 897 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 E7EWF7 191 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 SLC28A2O43868 658 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 KRT38O76015 456 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 PCP11498 1178 aaKnown RBP4.59□□□□□ -1.67
CLK1-203ENST00000409769 PRKCHP24723 683 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 GJC1P36383 396 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 NEDD4P46934 1319 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 GMPSP49915 693 aaPredicted RBP4.59□□□□□ -1.67
CLK1-203ENST00000409769 GABPAQ06546 454 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 KRT32Q14532 448 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 ASIC2Q16515 512 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 IMMTQ16891 758 aaKnown RBP4.59□□□□□ -1.67
CLK1-203ENST00000409769 ZNF585BQ52M93 769 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 ARL13AQ5H913 290 aaPredicted RBP4.59□□□□□ -1.67
CLK1-203ENST00000409769 C12orf60Q5U649 245 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 FAM171A1Q5VUB5 890 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 FKBP1CQ5VVH2 108 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 BRSK2Q8IWQ3 736 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 SUGP1Q8IWZ8 645 aaKnown RBP4.59□□□□□ -1.67
CLK1-203ENST00000409769 MB21D2Q8IYB1 491 aaPredicted RBP4.59□□□□□ -1.67
CLK1-203ENST00000409769 TEX11Q8IYF3 940 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 FBXL16Q8N461 479 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 KDM1BQ8NB78 822 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 BICD2Q8TD16 824 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 TMEM174Q8WUU8 243 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 KCNJ9Q92806 393 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 TTC14Q96N46 770 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 ATAD5Q96QE3 1844 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 NTPCRQ9BSD7 190 aaKnown RBP4.59□□□□□ -1.67
CLK1-203ENST00000409769 PAPPA2Q9BXP8 1791 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 AGXT2Q9BYV1 514 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 NACAP1Q9BZK3 213 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 CLPBQ9H078 707 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.59□□□□□ -1.67
CLK1-203ENST00000409769 NAPBQ9H115 298 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 ACTR5Q9H9F9 607 aaPredicted RBP4.59□□□□□ -1.67
CLK1-203ENST00000409769 MAP6D1Q9H9H5 199 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 NOD2Q9HC29 1040 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 MYOZ2Q9NPC6 264 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 ITM2CQ9NQX7 267 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 FBXO40Q9UH90 709 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 PGAP2Q9UHJ9 254 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 CNOT7Q9UIV1 285 aaKnown RBP4.59□□□□□ -1.67
CLK1-203ENST00000409769 COG5Q9UP83 839 aa4.59□□□□□ -1.67
CLK1-203ENST00000409769 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.59□□□□□ -1.67
CLK1-203ENST00000409769 MYH4Q9Y623 1939 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 CNTNAP1P78357 1384 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 WDR19Q8NEZ3 1342 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 TMEM272A0A1B0GTI8 110 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 TCRBV7S3A2A0A539 114 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 C17orf100A8MU93 164 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 ENTPD3O75355 529 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 DDNO94850 711 aaPredicted RBP4.58□□□□□ -1.68
CLK1-203ENST00000409769 NGFRP08138 427 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 CHRNB1P11230 501 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 LYL1P12980 280 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 CASTP20810 708 aaKnown RBP4.58□□□□□ -1.68
CLK1-203ENST00000409769 PSMA5P28066 241 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 TDO2P48775 406 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 NT5C2P49902 561 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 CYP2J2P51589 502 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 HAND2P61296 217 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 DHX8Q14562 1220 aaKnown RBP4.58□□□□□ -1.68
CLK1-203ENST00000409769 TAF5Q15542 800 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 ENTPD8Q5MY95 495 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 Q5PR19 223 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 RUFY3Q7L099 469 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 ZDHHC23Q8IYP9 409 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 TMEM217Q8N7C4 229 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 ANKRD42Q8N9B4 389 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 NCOA7Q8NI08 942 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 MORC4Q8TE76 937 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 NCSTNQ92542 709 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 SH3KBP1Q96B97 665 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 ZNF479Q96JC4 524 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 JAKMIP1Q96N16 626 aaKnown RBP4.58□□□□□ -1.68
CLK1-203ENST00000409769 NEK1Q96PY6 1258 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 TEFMQ96QE5 360 aaKnown RBP4.58□□□□□ -1.68
CLK1-203ENST00000409769 CADM1Q9BY67 442 aaKnown RBP4.58□□□□□ -1.68
CLK1-203ENST00000409769 ALDH8A1Q9H2A2 487 aaPredicted RBP4.58□□□□□ -1.68
CLK1-203ENST00000409769 HIPK3Q9H422 1215 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 AAMDCQ9H7C9 122 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms