RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 NR2C2P49116 596 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 GNG2P59768 71 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 GABARAPL2P60520 117 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 CLIP4Q8N3C7 705 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 NLGN2Q8NFZ4 835 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 OR6Q1Q8NGQ2 317 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 PHF10Q8WUB8 498 aaKnown RBP18.9■□□□□ 0.62
HOXC6-202ENST00000394331 VPS33AQ96AX1 596 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 PCDH12Q9NPG4 1184 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 FAM49BQ9NUQ9 324 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 ZDHHC2Q9UIJ5 367 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 OAZ3Q9UMX2 235 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 H3BRB1 525 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 METTL18O95568 372 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 CLIC3O95833 236 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 ZNF286BP0CG31 522 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 BMP4P12644 408 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 CYP2F1P24903 491 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 CD40LGP29965 261 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 C19orf57Q0VDD7 668 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 ARHGAP17Q68EM7 881 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 LCN8Q6JVE9 175 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 KIAA1841Q6NSI8 718 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 MOB2Q70IA6 237 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 C14orf80Q86SX3 495 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 SLCO6A1Q86UG4 719 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 DCLK2Q8N568 766 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 LRRC52Q8N7C0 313 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 UBXN10Q96LJ8 280 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 MYRFLQ96LU7 910 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 RBBP8Q99708 897 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 SNPHO15079 494 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 CABYRO75952 493 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 TPPPO94811 219 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 GSNP06396 782 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 LIMK2P53671 638 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 DPYSL2Q16555 572 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 CTF1Q16619 201 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 SPATS1Q496A3 300 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 CCDC58Q4VC31 144 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 MUL1Q969V5 352 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 ROPN1LQ96C74 230 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 ANKHQ9HCJ1 492 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 SFMBT1Q9UHJ3 866 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 ZNF229Q9UJW7 825 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 A0A1W2PQ67 120 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 C16orf96A6NNT2 1141 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 EVPLLA8MZ36 301 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 EI24O14681 340 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 LTFP02788 710 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 GPIP06744 558 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 SPRP35270 261 aaPredicted RBP18.89■□□□□ 0.61
HOXC6-202ENST00000394331 GRK3P35626 688 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 GRIA4P48058 902 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 ECT2LQ008S8 904 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 BNIP2Q12982 314 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 BEST2Q8NFU1 509 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 GTF3C2Q8WUA4 911 aaPredicted RBP18.89■□□□□ 0.61
HOXC6-202ENST00000394331 SLC25A23Q9BV35 468 aa18.89■□□□□ 0.61
HOXC6-202ENST00000394331 INTS10Q9NVR2 710 aaKnown RBP18.89■□□□□ 0.61
HOXC6-202ENST00000394331 SCNN1AP37088 669 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 CASP3P42574 277 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 CCNA1P78396 465 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 ARHGEF6Q15052 776 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 HIST2H2ACQ16777 129 aaPredicted RBP18.88■□□□□ 0.61
HOXC6-202ENST00000394331 ZNF792Q3KQV3 632 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 CHST15Q7LFX5 561 aaPredicted RBP18.88■□□□□ 0.61
HOXC6-202ENST00000394331 SPARTQ8N0X7 666 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 EMILIN2Q9BXX0 1053 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 EIF2B3Q9NR50 452 aaKnown RBP18.88■□□□□ 0.61
HOXC6-202ENST00000394331 NPAP1Q9NZP6 1156 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 TTC24A2A3L6 582 aaPredicted RBP18.88■□□□□ 0.61
HOXC6-202ENST00000394331 SDHDO14521 159 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 CYP2C8P10632 490 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 M6PRP20645 277 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 YAP1P46937 504 aaKnown RBP18.88■□□□□ 0.61
HOXC6-202ENST00000394331 PPP5CP53041 499 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 FRG1Q14331 258 aaKnown RBP18.88■□□□□ 0.61
HOXC6-202ENST00000394331 GRIK4Q16099 956 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 DGUOKQ16854 277 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 SLC26A9Q7LBE3 791 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 PIWIL3Q7Z3Z3 882 aaKnown RBP18.88■□□□□ 0.61
HOXC6-202ENST00000394331 DDIASQ8IXT1 998 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 CMTR2Q8IYT2 770 aaKnown RBP18.88■□□□□ 0.61
HOXC6-202ENST00000394331 ASCC1Q8N9N2 400 aaKnown RBP18.88■□□□□ 0.61
HOXC6-202ENST00000394331 OR6B3Q8NGW1 331 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 HMGCLL1Q8TB92 370 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 CDCA5Q96FF9 252 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 MARK4Q96L34 752 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 NECTIN3Q9NQS3 549 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.88■□□□□ 0.61
HOXC6-202ENST00000394331 DGKBQ9Y6T7 804 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 MCM3APO60318 1980 aa18.88■□□□□ 0.61
HOXC6-202ENST00000394331 ZSWIM8A7E2V4 1837 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 GABARAPO95166 117 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 MAP3K6O95382 1288 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 MYL3P08590 195 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 CDH1P12830 882 aa18.87■□□□□ 0.61
HOXC6-202ENST00000394331 TFE3P19532 575 aaPredicted RBP18.87■□□□□ 0.61
HOXC6-202ENST00000394331 ITIH1P19827 911 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms