RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TMEM110Q86TL2 294 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 CIR1Q86X95 450 aaPredicted RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 HMCESQ96FZ2 354 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 OXCT2Q9BYC2 517 aaPredicted RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 BRD9Q9H8M2 597 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 MAPRE3Q9UPY8 281 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 PPEF2O14830 753 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 METTL18O95568 372 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 ANPEPP15144 967 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 TCF4P15884 667 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 IGFBP4P22692 258 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 PRKAG1P54619 331 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 TCEA2Q15560 299 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 TRIP4Q15650 581 aaPredicted RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 TIGD2Q4W5G0 525 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 ARL13AQ5H913 290 aaPredicted RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 INTS11Q5TA45 600 aaKnown RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 ZNF697Q5TEC3 545 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 FITM2Q8N6M3 262 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 GPR156Q8NFN8 814 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 PSMG2Q969U7 264 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 ZDHHC18Q9NUE0 388 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 GTF2IRD1Q9UHL9 959 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 PSME2Q9UL46 239 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 ARIH1Q9Y4X5 557 aaPredicted RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 NMBRP28336 390 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 HNF4AP41235 474 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 RXRGP48443 463 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 SLC7A2P52569 658 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 KIAA2013Q8IYS2 634 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 CD101Q93033 1021 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 FUBP3Q96I24 572 aaKnown RBP eCLIP13.63□□□□□ -0.23
C9orf47-203ENST00000375851 TRAPPC9Q96Q05 1148 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 ARMC7Q9H6L4 198 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 PCDH12Q9NPG4 1184 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 PRPF19Q9UMS4 504 aaKnown RBP13.63□□□□□ -0.23
C9orf47-203ENST00000375851 TBC1D30Q9Y2I9 924 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 ACLYP53396 1101 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 CASP12Q6UXS9 341 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 REM2Q8IYK8 340 aaPredicted RBP13.63□□□□□ -0.23
C9orf47-203ENST00000375851 TERB1Q8NA31 727 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 TPRKBQ9Y3C4 175 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 A0A087WXM4 84 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 TULP2O00295 520 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 NDST2P52849 883 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 CDH4P55283 916 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 CERS6Q6ZMG9 384 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 CLVS1Q8IUQ0 354 aaPredicted RBP13.63□□□□□ -0.23
C9orf47-203ENST00000375851 GSTCDQ8NEC7 633 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 RORBQ92753 470 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
C9orf47-203ENST00000375851 ZFRQ96KR1 1074 aaKnown RBP13.63□□□□□ -0.23
C9orf47-203ENST00000375851 GPR21Q99679 349 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 IGSF9Q9P2J2 1179 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 ENOPH1Q9UHY7 261 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 ASF1AQ9Y294 204 aa13.63□□□□□ -0.23
C9orf47-203ENST00000375851 GLYATL1P3A0A0U1RQE8 302 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 GRM6O15303 877 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 SHOX2O60902 331 aaPredicted RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 INHAP05111 366 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 SOX6P35712 828 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 POLD2P49005 469 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 MAPKAPK2P49137 400 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 FAM46CQ5VWP2 391 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 TEPSINQ96N21 525 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 ABCG8Q9H221 673 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 PAPOLBQ9NRJ5 636 aaKnown RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 PCDHB1Q9Y5F3 818 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 ZFP37Q9Y6Q3 630 aaPredicted RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 GSC2O15499 205 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 NRP2O60462 931 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 TGDSO95455 350 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 CLTBP09497 229 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 CTSEP14091 401 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 NRLP54845 237 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 TYW3Q6IPR3 259 aaKnown RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 KIAA1324Q6UXG2 1013 aaKnown RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 OR8D1Q8WZ84 308 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 MAGEB10Q96LZ2 347 aaPredicted RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 SLC39A8Q9C0K1 460 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 SSU72Q9NP77 194 aaKnown RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 TBC1D14Q9P2M4 693 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 MSX2P35548 267 aaPredicted RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 FSTL1Q12841 308 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 TSTD2Q5T7W7 516 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 CDCA2Q69YH5 1023 aaPredicted RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 ZNF549Q6P9A3 640 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 PRSS55Q6UWB4 352 aaPredicted RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 UBE2R2Q712K3 238 aaPredicted RBP13.62□□□□□ -0.23
C9orf47-203ENST00000375851 IFNL1Q8IU54 200 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 NPLOC4Q8TAT6 608 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 NACC2Q96BF6 587 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 NPAS2Q99743 824 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 DCUN1D5Q9BTE7 237 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 NLNQ9BYT8 704 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 A0A088AWK7 358 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 NPEPPSL1A6NEC2 478 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 IRAK2O43187 625 aa13.62□□□□□ -0.23
C9orf47-203ENST00000375851 SLC22A3O75751 556 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms