RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ARHGAP36Q6ZRI8 547 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 METTL3Q86U44 580 aaKnown RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 ATOH1Q92858 354 aaPredicted RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 ISG20Q96AZ6 181 aaKnown RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 VCXQ9H320 206 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 FCF1Q9Y324 198 aaKnown RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 MYO15AQ9UKN7 3530 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 DMDP11532 3685 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 ELAVL3Q14576 367 aaKnown RBP20.59■□□□□ 0.89
SYNC-201ENST00000373484 STK40Q8N2I9 435 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 PCDH20Q8N6Y1 951 aaKnown RBP20.59■□□□□ 0.89
SYNC-201ENST00000373484 PLD5Q8N7P1 536 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 NAT8LQ8N9F0 302 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 GLIS1Q8NBF1 620 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 SIPA1Q96FS4 1042 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 FAM129BQ96TA1 746 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 SH3GL3Q99963 347 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 MANSC1Q9H8J5 431 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 IPO11Q9UI26 975 aaKnown RBP20.59■□□□□ 0.89
SYNC-201ENST00000373484 R4GN57 208 aa20.59■□□□□ 0.89
SYNC-201ENST00000373484 A0A1W2PPM1 405 aa20.58■□□□□ 0.89
SYNC-201ENST00000373484 NVLO15381 856 aaKnown RBP20.58■□□□□ 0.89
SYNC-201ENST00000373484 CBX6O95503 412 aa20.58■□□□□ 0.89
SYNC-201ENST00000373484 GSTA2P09210 222 aa20.58■□□□□ 0.89
SYNC-201ENST00000373484 CNR2P34972 360 aa20.58■□□□□ 0.89
SYNC-201ENST00000373484 IL10RBQ08334 325 aa20.58■□□□□ 0.89
SYNC-201ENST00000373484 ZNF449Q6P9G9 518 aa20.58■□□□□ 0.89
SYNC-201ENST00000373484 KIAA1324Q6UXG2 1013 aaKnown RBP20.58■□□□□ 0.89
SYNC-201ENST00000373484 MTDHQ86UE4 582 aaKnown RBP20.58■□□□□ 0.89
SYNC-201ENST00000373484 OR2A12Q8NGT7 310 aa20.58■□□□□ 0.89
SYNC-201ENST00000373484 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.58■□□□□ 0.89
SYNC-201ENST00000373484 SP110Q9HB58 689 aa20.58■□□□□ 0.89
SYNC-201ENST00000373484 UBA2Q9UBT2 640 aaPredicted RBP20.58■□□□□ 0.89
SYNC-201ENST00000373484 ANKRD36A6QL64 1941 aa20.58■□□□□ 0.88
SYNC-201ENST00000373484 IQANK1A0A1B0GTG1 560 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 MCF2LO15068 1137 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 TMCC1O94876 653 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 KRT10P13645 584 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 RPS14P62263 151 aaKnown RBP20.57■□□□□ 0.88
SYNC-201ENST00000373484 CDK16Q00536 496 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 GBE1Q04446 702 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 SLC18A2Q05940 514 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 GALNT2Q10471 571 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 ZNF776Q68DI1 518 aaPredicted RBP20.57■□□□□ 0.88
SYNC-201ENST00000373484 BBS12Q6ZW61 710 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 CACUL1Q86Y37 369 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 RFX6Q8HWS3 928 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 LRRC49Q8IUZ0 686 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 TRIM42Q8IWZ5 723 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 ATPAF2Q8N5M1 289 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 SKA1Q96BD8 255 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 FAM136AQ96C01 138 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 CYTH2Q99418 400 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 PAFAH2Q99487 392 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 FAM118BQ9BPY3 351 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 CADM1Q9BY67 442 aaKnown RBP20.57■□□□□ 0.88
SYNC-201ENST00000373484 TNKS2Q9H2K2 1166 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 NPHS2Q9NP85 383 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 USP34Q70CQ2 3546 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 THADAQ6YHU6 1953 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.57■□□□□ 0.88
SYNC-201ENST00000373484 APOL1O14791 398 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 HGSO14964 777 aaPredicted RBP20.57■□□□□ 0.88
SYNC-201ENST00000373484 GSC2O15499 205 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 HRO43593 1189 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 MAFKO60675 156 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 RNASEH1O60930 286 aaKnown RBP20.57■□□□□ 0.88
SYNC-201ENST00000373484 ZSCAN5DPP0CG00 497 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 ZFXP17010 805 aaPredicted RBP20.57■□□□□ 0.88
SYNC-201ENST00000373484 USP39Q53GS9 565 aaKnown RBP20.57■□□□□ 0.88
SYNC-201ENST00000373484 PLPP6Q8IY26 295 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 DCAKDQ8WVC6 231 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 GAB3Q8WWW8 586 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 OR8D1Q8WZ84 308 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 CCDC28BQ9BUN5 200 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 TSSK1BQ9BXA7 367 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 FRMD8Q9BZ67 464 aaPredicted RBP20.57■□□□□ 0.88
SYNC-201ENST00000373484 FAM86C1Q9NVL1 165 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 DTLQ9NZJ0 730 aa20.57■□□□□ 0.88
SYNC-201ENST00000373484 USP36Q9P275 1121 aaKnown RBP20.57■□□□□ 0.88
SYNC-201ENST00000373484 BNIP3LO60238 219 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 ZNF217O75362 1048 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 NEFHP12036 1026 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 P2RY2P41231 377 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 GARSP41250 739 aaKnown RBP20.56■□□□□ 0.88
SYNC-201ENST00000373484 NBL1P41271 181 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 ARFIP2P53365 341 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 ZBTB16Q05516 673 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 SLC10A2Q12908 348 aaPredicted RBP20.56■□□□□ 0.88
SYNC-201ENST00000373484 SRSF5Q13243 272 aaKnown RBP20.56■□□□□ 0.88
SYNC-201ENST00000373484 TFDP2Q14188 446 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 MUM1Q2TAK8 710 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 MAP7D1Q3KQU3 841 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 KAZNQ674X7 775 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 MMAAQ8IVH4 418 aaKnown RBP20.56■□□□□ 0.88
SYNC-201ENST00000373484 ABCA7Q8IZY2 2146 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 PDIK1LQ8N165 341 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 TCP10LQ8TDR4 215 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 ZNF599Q96NL3 588 aa20.56■□□□□ 0.88
SYNC-201ENST00000373484 MIPEPQ99797 713 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms