RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 TRIM38O00635 465 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 ANGPT2O15123 496 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 SRP72O76094 671 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 S1PR4O95977 384 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 COL6A2P12110 1019 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 NCK1P16333 377 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 PRDX6P30041 224 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 AGTR2P50052 363 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 APLP1P51693 650 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 PRKAA2P54646 552 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 DIO3P55073 304 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 ROR2Q01974 943 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 HNRNPDQ14103 355 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 SEMA3AQ14563 771 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 VARS2Q5ST30 1063 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 MFSD14CQ5VZR4 134 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 PAQR3Q6TCH7 311 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 KDELC1Q6UW63 502 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 ZBTB49Q6ZSB9 765 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 RAB44Q7Z6P3 723 aaPredicted RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 ISCA2Q86U28 154 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 LPCAT1Q8NF37 534 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 OR4K2Q8NGD2 314 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 TSPAN17Q96FV3 270 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 ZNF512Q96ME7 567 aaPredicted RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 SLC29A1Q99808 456 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 PRKD2Q9BZL6 878 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 C6orf203Q9P0P8 240 aaPredicted RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 RNF112Q9ULX5 631 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 PCDHGA7Q9Y5G6 932 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 PLXNB2O15031 1838 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 CROCCQ5TZA2 2017 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 ARHGEF37A1IGU5 675 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 CDC7O00311 574 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 KATNA1O75449 491 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 NDUFS3O75489 264 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 TRIM25Q14258 630 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 OR4D1Q15615 310 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 TSNQ15631 228 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 RBBP7Q16576 425 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 NADK2Q4G0N4 442 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 ZRANB3Q5FWF4 1079 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 OGFRL1Q5TC84 451 aaPredicted RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 GABPB2Q8TAK5 448 aaPredicted RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 C19orf60Q96EN9 201 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 IMP4Q96G21 291 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 TRAPPC9Q96Q05 1148 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 SEPHS2Q99611 448 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 CCDC28BQ9BUN5 200 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 NMRK2Q9NPI5 230 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 GKN1Q9NS71 199 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 NEU3Q9UQ49 428 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 BTN3A1O00481 513 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 TNFRSF10BO14763 440 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 TLR5O60602 858 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 MTHFD1P11586 935 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 EEF1DP29692 281 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 PRDX3P30048 256 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 CYP2C18P33260 490 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 CA8P35219 290 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 PIK3CGP48736 1102 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 CLCN5P51795 746 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 MAPK10P53779 464 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 PRKCZQ05513 592 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 TWF1Q12792 350 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 TAF12Q16514 161 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 PTPRNQ16849 979 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 SGO1Q5FBB7 561 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 UGT2A3Q6UWM9 527 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 ADGRG6Q86SQ4 1221 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 DHFR2Q86XF0 187 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 DENND1CQ8IV53 801 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 DCP1BQ8IZD4 617 aaKnown RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 HMGCLL1Q8TB92 370 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 CCT7Q99832 543 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 GPR62Q9BZJ7 368 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 ABCG8Q9H221 673 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 SPAG4Q9NPE6 437 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 SLC45A1Q9Y2W3 748 aa8.27□□□□□ -1.09
CD46-205ENST00000358170 HEMK1Q9Y5R4 338 aaPredicted RBP8.27□□□□□ -1.09
CD46-205ENST00000358170 GIPC1O14908 333 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 INPP4BO15327 924 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 OR1I1O60431 355 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 NPHS1O60500 1241 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 BCAS2O75934 225 aaPredicted RBP8.26□□□□□ -1.09
CD46-205ENST00000358170 SNUPNO95149 360 aaKnown RBP8.26□□□□□ -1.09
CD46-205ENST00000358170 FAM58BPP0C7Q3 252 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 GGT5P36269 586 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 UNC50Q53HI1 259 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 MRNIPQ6NTE8 343 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 ZNF549Q6P9A3 640 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 PRSS55Q6UWB4 352 aaPredicted RBP8.26□□□□□ -1.09
CD46-205ENST00000358170 ATP6V0D2Q8N8Y2 350 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 SUSD3Q96L08 255 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 MCMBPQ9BTE3 642 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 UPF3AQ9H1J1 476 aaKnown RBP8.26□□□□□ -1.09
CD46-205ENST00000358170 CRISPLD1Q9H336 500 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 SOX17Q9H6I2 414 aaPredicted RBP8.26□□□□□ -1.09
CD46-205ENST00000358170 ZFYVE28Q9HCC9 887 aa8.26□□□□□ -1.09
CD46-205ENST00000358170 GALPQ9UBC7 116 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms