RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PPIBP23284 216 aaKnown RBP11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 ZNF613Q6PF04 617 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 DENND1CQ8IV53 801 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 MRPL57Q9BQC6 102 aaKnown RBP11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 SNX7Q9UNH6 387 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 MFHAS1Q9Y4C4 1052 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 CXCR2P25025 360 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 IST1P53990 364 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 SNRPD1P62314 119 aaKnown RBP11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 IL18Q14116 193 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 GIT2Q14161 759 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 JAZF1Q86VZ6 243 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 SPAG16Q8N0X2 631 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 MEIOBQ8N635 442 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 OR5T3Q8NGG3 340 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC2A14Q8TDB8 520 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 RBM4BQ9BQ04 359 aaKnown RBP11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 RBM4Q9BWF3 364 aaKnown RBP11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 MARCH7Q9H992 704 aa11.52□□□□□ -0.57
SPTBN1-202ENST00000356805 A0A075B6Q4 140 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 SH3D21A4FU49 640 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 REM1O75628 298 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 RSL1D1O76021 490 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 SNX4O95219 450 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 HMGCRP04035 888 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ITGA2BP08514 1039 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 MSL3P1P0C860 447 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 PRKG2Q13237 762 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 PTGES3Q15185 160 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 MTX3Q5HYI7 312 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 XKRXQ6PP77 449 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 PTCHD4Q6ZW05 846 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 TAS1R2Q8TE23 839 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 UBE2E3Q969T4 207 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 MKLN1Q9UL63 735 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ISM1B1AKI9 464 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 EPHX2P34913 555 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 TIE1P35590 1138 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 RAP1GAP2Q684P5 730 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 CXorf57Q6NSI4 855 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ZNF615Q8N8J6 731 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC4A11Q8NBS3 891 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 TSEN15Q8WW01 171 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 TAMM41Q96BW9 452 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 DHRS1Q96LJ7 313 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 C16orf46Q6P387 395 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 THAP5Q7Z6K1 395 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 PIH1D2Q8WWB5 315 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC47A1Q96FL8 570 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 EBF2Q9HAK2 575 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 RRAGCQ9HB90 399 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 CACNA1FO60840 1977 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 METTL21EPA6NDL7 271 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ORC5O43913 435 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 TBL1XO60907 577 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 CST1P01037 141 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 CDH8P55286 799 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 BACE1P56817 501 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ELAVL2Q12926 359 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ERICH5Q6P6B1 374 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 CRELD1Q96HD1 420 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 CRB1P82279 1406 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 NRXN1Q9ULB1 1477 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 H3BRB1 525 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ABL2P42684 1182 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ABCG1P45844 678 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ELP6Q0PNE2 266 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 GALNT3Q14435 633 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 INPP4AQ96PE3 977 aaPredicted RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 TUT1Q9H6E5 874 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 MRPL17Q9NRX2 175 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 RNF19AQ9NV58 838 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 SMPD3Q9NY59 655 aaPredicted RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 USP32Q8NFA0 1604 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 A0A0G2JPF8 293 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 HNRNPCL3B7ZW38 293 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 PGRMC2O15173 223 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 HNRNPCL4P0DMR1 293 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 EIF4BP23588 611 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 PSMA1P25786 263 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 VBP1P61758 197 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 CEP68Q76N32 757 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 CNTD1Q8N815 330 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 IFT80Q9P2H3 777 aaPredicted RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 MSRAQ9UJ68 235 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 PCDHA11Q9Y5I1 949 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 FRMPD4Q14CM0 1322 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ZMPSTE24O75844 475 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 NCK1P16333 377 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 HERC3Q15034 1050 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 CNPY1Q3B7I2 92 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 ATP13A4Q4VNC1 1196 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 PIK3R6Q5UE93 754 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 LIPMQ5VYY2 423 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 POLNQ7Z5Q5 900 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 MCEMP1Q8IX19 187 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms