RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ITGA8P53708 1063 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF284Q2VY69 593 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 GPR180Q86V85 440 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ATG16L2Q8NAA4 619 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ARL8AQ96BM9 186 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TDRD3Q9H7E2 651 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MORF4L1Q9UBU8 362 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ADGRB3O60242 1522 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 M0R233 179 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MSH4O15457 936 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TGOLN2O43493 480 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ICMTO60725 284 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SCN2BO60939 215 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PPM1BO75688 479 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PNPP00491 289 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CKMP06732 381 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ODC1P11926 461 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 HNF1BP35680 557 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CLK3P49761 638 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CDH8P55286 799 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 GRK1Q15835 563 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TANGO2Q6ICL3 276 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF746Q6NUN9 644 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PDSS2Q86YH6 399 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 HERPUD2Q9BSE4 406 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 NUDT15Q9NV35 164 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 GJE1A6NN92 205 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 GGCTO75223 188 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CYP1A1P04798 512 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 KCNK10P57789 538 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CXCR4P61073 352 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CDKL1Q00532 357 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 BTKQ06187 659 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 FAM160B1Q5W0V3 765 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PAPD4Q6PIY7 484 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ARL14Q8N4G2 192 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CCDC74AQ96AQ1 378 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CCDC74BQ96LY2 380 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 NEURL2Q9BR09 285 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 EPB41L4BQ9H329 900 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PCDHGA6Q9Y5G7 932 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UBA6A0AVT1 1052 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UBXN8O00124 270 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TNNI1P19237 187 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ALDH1A3P47895 512 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 FANCBQ8NB91 859 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 COPS7BQ9H9Q2 264 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MRPS7Q9Y2R9 242 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MYL12BO14950 172 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MAGEB4O15481 346 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 NDUFA2O43678 99 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 KCNJ13O60928 360 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MYBP10242 640 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PSMB9P28065 219 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SLCO1A2P46721 670 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MAZP56270 477 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SEZ6L2Q6UXD5 910 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UBQLNLQ8IYU4 475 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 BPIFB6Q8NFQ5 453 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MCMBPQ9BTE3 642 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TTPALQ9BTX7 342 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SEMA3GQ9NS98 782 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CHTOPQ9Y3Y2 248 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CACNG2Q9Y698 323 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 FGFR4P22455 802 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CCNFP41002 786 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MTHFRP42898 656 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SEC24CP53992 1094 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TXNRD1Q16881 649 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 FAM26DQ5JW98 314 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 GALNT4Q8N4A0 578 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 FAM227BQ96M60 508 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TRIM2Q9C040 744 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 NUDT5Q9UKK9 219 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PRMT5O14744 637 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ZBTB24O43167 697 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 AP5Z1O43299 807 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 IL7RP16871 459 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CYS1Q717R9 158 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 DGKHQ86XP1 1220 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SLC9A9Q8IVB4 645 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UXS1Q8NBZ7 420 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ING5Q8WYH8 240 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TRNT1Q96Q11 434 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 BLZF1Q9H2G9 400 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 NARFQ9UHQ1 456 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PRRT4C9JH25 899 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 F8W036 122 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PTCD1O75127 700 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 STAG3L2P0CL84 134 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CYP2D6P10635 497 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 RAG1P15918 1043 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 RPA1P27694 616 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MTMR1Q13613 665 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CBWD3Q5JTY5 395 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CBWD5Q5RIA9 395 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 HIST2H3PS2Q5TEC6 136 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TYW3Q6IPR3 259 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms