RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 OR52J3Q8NH60 311 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 CYP2S1Q96SQ9 504 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 C9orf16Q9BUW7 83 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 NXF3Q9H4D5 531 aaKnown RBP10.58□□□□□ -0.72
CLN8-201ENST00000331222 ALG2Q9H553 416 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 PNO1Q9NRX1 252 aaKnown RBP10.58□□□□□ -0.72
CLN8-201ENST00000331222 B4GALT5O43286 388 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 TGFB3P10600 412 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 UGT1A5P35504 534 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 CASP5P51878 434 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 AMIGO2Q86SJ2 522 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 UBE2J2Q8N2K1 259 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 IL22Q9GZX6 179 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 OAS3Q9Y6K5 1087 aaKnown RBP10.58□□□□□ -0.72
CLN8-201ENST00000331222 CNTNAP4Q9C0A0 1308 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 QSOX1O00391 747 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 DDX3YO15523 660 aaKnown RBP10.58□□□□□ -0.72
CLN8-201ENST00000331222 SERPINA3P01011 423 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 CSN2P05814 226 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 ICAM3P32942 547 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 KCNA10Q16322 511 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 LIN54Q6MZP7 749 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 HID1Q8IV36 788 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 STAG3L4Q8TBR4 150 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 FATE1Q969F0 183 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 SPATA9Q9BWV2 254 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 BATF3Q9NR55 127 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 NKIRAS2Q9NYR9 191 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 NRCAMQ92823 1304 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 XKRYO14609 159 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 STX11O75558 287 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 GLUD1P00367 558 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 MSX1P28360 303 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 RYKP34925 604 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 ZNF268Q14587 947 aaPredicted RBP10.58□□□□□ -0.72
CLN8-201ENST00000331222 WDR59Q6PJI9 974 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 ALYREFQ86V81 257 aaKnown RBP10.58□□□□□ -0.72
CLN8-201ENST00000331222 C10orf107Q8IVU9 208 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 PTCD2Q8WV60 388 aaKnown RBP10.58□□□□□ -0.72
CLN8-201ENST00000331222 PIH1D2Q8WWB5 315 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 DNAJA3Q96EY1 480 aa10.58□□□□□ -0.72
CLN8-201ENST00000331222 ELAC1Q9H777 363 aaKnown RBP10.58□□□□□ -0.72
CLN8-201ENST00000331222 ZNF490Q9ULM2 529 aaPredicted RBP10.58□□□□□ -0.72
CLN8-201ENST00000331222 CYP1A1P04798 512 aaPredicted RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 IL12BP29460 328 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 RPL22P35268 128 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 DNASE1L1P49184 302 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 PHF19Q5T6S3 580 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 RASGRP3Q8IV61 690 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 SLC38A3Q99624 504 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 GMEB2Q9UKD1 530 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 AGO1Q9UL18 857 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 ERVK-11Q9UQG0 969 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 SETBP1Q9Y6X0 1596 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 ACKR2O00590 384 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 SMAD9O15198 467 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 SLC7A2P52569 658 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 NRG3P56975 720 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 HSPB3Q12988 150 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 SMCO1Q147U7 214 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 OAFQ86UD1 273 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 ZDHHC17Q8IUH5 632 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 WNT8BQ93098 351 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 RPL10LQ96L21 214 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 B3GNT5Q9BYG0 378 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 ERCC6L2Q5T890 1561 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 G3V2T6 193 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 TTPAP49638 278 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 TRIM28Q13263 835 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 PIK3R6Q5UE93 754 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 ZDHHC20Q5W0Z9 365 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 AFTPHQ6ULP2 937 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 GPC2Q8N158 579 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 CPA6Q8N4T0 437 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 TRPM4Q8TD43 1214 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 PPCDCQ96CD2 204 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 GMIPQ9P107 970 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 TIMM8BQ9Y5J9 83 aaPredicted RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 PDE4DIPQ5VU43 2346 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 A0A1W2PRG6 482 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 CDH3P22223 829 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 UBA1P22314 1058 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 AXLP30530 894 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 GDI2P50395 445 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 PTENP60484 403 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 PPP4CP60510 307 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 SAMD4BQ5PRF9 694 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 PPP2R2DQ66LE6 453 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 ZNF366Q8N895 744 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 SETD9Q8NE22 299 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 ZFP28Q8NHY6 868 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 XAGE5Q8WWM1 108 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 SHC3Q92529 594 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 HBEGFQ99075 208 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 TCF25Q9BQ70 676 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 SNRNP25Q9BV90 132 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 C1QTNF1Q9BXJ1 281 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 DNAJC18Q9H819 358 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 H3BNH8 94 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 KPNA4O00629 521 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms