RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 MRPL9Q9BYD2 267 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ISPDA4D126 451 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ARL5CA6NH57 179 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CENPBD1B2RD01 187 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 GTPBP1O00178 669 aaKnown RBP12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 RFXANKO14593 260 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 GSC2O15499 205 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 RNASEH1O60930 286 aaKnown RBP12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 PGLSO95336 258 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 UNC5AQ6ZN44 842 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 BBS1Q8NFJ9 593 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ZNF69Q9UC07 566 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ABLIM1O14639 778 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 OR10H2O60403 315 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 UGT2B11O75310 529 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ATAD3CQ5T2N8 411 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 IDNKQ5T6J7 187 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 TBC1D17Q9HA65 648 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ATP10BO94823 1461 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 C12orf71A8MTZ7 269 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 STAG3L1P0CL83 205 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 PSMA1P25786 263 aaKnown RBP12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ECHS1P30084 290 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 PNPLA4P41247 253 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 BST1Q10588 318 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 GFOD2Q3B7J2 385 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 FOXRED2Q8IWF2 684 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 PM20D2Q8IYS1 436 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 OR8K3Q8NH51 312 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 RAET1EQ8TD07 263 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CD300LFQ8TDQ1 290 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 STARD8Q92502 1023 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 RNF31Q96EP0 1072 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ASB2Q96Q27 587 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 TLR10Q9BXR5 811 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 COQ3Q9NZJ6 369 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 KIAA1257Q9ULG3 409 aa12.77□□□□□ -0.36
RAB11FIP1-202ENST00000330843 GIT2Q14161 759 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 TRAPPC5Q8IUR0 188 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 GALNT12Q8IXK2 581 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 ARMC5Q96C12 935 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 EXO5Q9H790 373 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 FARSAQ9Y285 508 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 POLR3HQ9Y535 204 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 PCYT1BQ9Y5K3 369 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CLDN25C9JDP6 229 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 AIPO00170 330 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 TPST2O60704 377 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 SCGB1D2O95969 90 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 SP140Q13342 867 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 AUHQ13825 339 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 PDK4Q16654 411 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 PPM1LQ5SGD2 360 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 SRFBP1Q8NEF9 429 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 COQ8AQ8NI60 647 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 RP9Q8TA86 221 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 C11orf16Q9NQ32 467 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 TLR8Q9NR97 1041 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 SLC39A1Q9NY26 324 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CKLFQ9UBR5 152 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 FBXO10Q9UK96 956 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CKBP12277 381 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 RPL9P32969 192 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CDH8P55286 799 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CDC42EP1Q00587 391 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 HERC3Q15034 1050 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 DNAJB7Q7Z6W7 309 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 PTGR2Q8N8N7 351 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 TMIEQ8NEW7 156 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 DNAJA4Q8WW22 397 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 PHB2Q99623 299 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 NEUROD4Q9HD90 331 aa12.77□□□□□ -0.37
RAB11FIP1-202ENST00000330843 FABP12A6NFH5 140 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 NPIPA7E9PJI5 369 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 NPIPA8P0DM63 369 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 GZMAP12544 262 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 YBX3P16989 372 aaKnown RBP eCLIP12.76□□□□□ -0.371e-7■□□□□ 8.2
RAB11FIP1-202ENST00000330843 SLC12A3P55017 1021 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 PTBP2Q9UKA9 531 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 RPTORQ8N122 1335 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CYP1A1P04798 512 aaPredicted RBP12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 RGS6P49758 472 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 TMPRSS11AQ6ZMR5 421 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 CCDC120Q96HB5 630 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 ZFP3Q96NJ6 502 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 PGLYRP2Q96PD5 576 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 TSPAN16Q9UKR8 245 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 AIREO43918 545 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 MMP10P09238 476 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 LTA4HP09960 611 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 BLMHQ13867 455 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 LIN52Q52LA3 116 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 HSD17B12Q53GQ0 312 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 WDR59Q6PJI9 974 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 HSPBAP1Q96EW2 488 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 EQTNQ9NQ60 294 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 IKZF2Q9UKS7 526 aa12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 ZNF705EA8MWA4 302 aaPredicted RBP12.76□□□□□ -0.37
RAB11FIP1-202ENST00000330843 E9PAM4 449 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms