RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 MRPL58Q14197 206 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 NPWQ8N729 165 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 UNKQ9C0B0 810 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 PRDM5Q9NQX1 630 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 NLRC5Q86WI3 1866 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 SOCS2O14508 198 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 SLC7A1P30825 629 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 CXCR3P49682 368 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 TPI1P60174 286 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 NHSL2Q5HYW2 709 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 CERCAMQ5T4B2 595 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 CHSY3Q70JA7 882 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 RDH11Q8TC12 318 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 GIPC2Q8TF65 315 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 APOL2Q9BQE5 337 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 C1QTNF1Q9BXJ1 281 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 PAIP1Q9H074 479 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 TRPC7Q9HCX4 862 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 UTP6Q9NYH9 597 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 IPO11Q9UI26 975 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 PCDHB5Q9Y5E4 795 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 A0A087WXM4 84 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 ZNF839A8K0R7 811 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 SDHDO14521 159 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 SYN3O14994 580 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 LRIG2O94898 1065 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 GNAO1P09471 354 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 PORP16435 677 aaPredicted RBP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 GLUD2P49448 558 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 USP10Q14694 798 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 ANO4Q32M45 955 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 ZBED5Q49AG3 693 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 LAYNQ6UX15 382 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 FSTL5Q8N475 847 aaPredicted RBP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 KDM1BQ8NB78 822 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 CELF6Q96J87 481 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 CRISPLD2Q9H0B8 497 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 MRPL40Q9NQ50 206 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 PFDN4Q9NQP4 134 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 TBC1D23Q9NUY8 699 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 CACNA2D2Q9NY47 1150 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 XPR1Q9UBH6 696 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 CROCCQ5TZA2 2017 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 DLX3O60479 287 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 CBFA2T3O75081 653 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 HSPA1AP0DMV8 641 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 HSPA1BP0DMV9 641 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 ACRP10323 421 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 CSE1LP55060 971 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 LRRC26Q2I0M4 334 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 REP15Q6BDI9 236 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 ZNF280DQ6N043 979 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 LRRC8EQ6NSJ5 796 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 TTC33Q6PID6 262 aaPredicted RBP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 SNX31Q8N9S9 440 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 FAM110BQ8TC76 370 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 THAP11Q96EK4 314 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 PGAP3Q96FM1 320 aaPredicted RBP17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 OMDQ99983 421 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 GTSE1Q9NYZ3 720 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 GMIPQ9P107 970 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 DOLKQ9UPQ8 538 aa17.22■□□□□ 0.35
SCAMP4-201ENST00000316097 TCRBV3S1A0A5B6 114 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 SAC3D1A6NKF1 404 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 TRIM24O15164 1050 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 AKAP10O43572 662 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 SEC24DO94855 1032 aaPredicted RBP17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 ATE1O95260 518 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 STAMBPO95630 424 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 CSF2RAP15509 400 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 PAX3P23760 479 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 HMOX2P30519 316 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 ALDH7A1P49419 539 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 SEMA3BQ13214 749 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 KCTD21Q4G0X4 260 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 RWDD4Q6NW29 188 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 SPATA6LQ8N4H0 392 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 STYXQ8WUJ0 223 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 TOP1MTQ969P6 601 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 PBXIP1Q96AQ6 731 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 EFHD1Q9BUP0 239 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 VN1R3Q9BXE9 311 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 CHRAC1Q9NRG0 131 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 ABCC13Q9NSE7 274 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 CCDC167Q9P0B6 97 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 TBX21Q9UL17 535 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 CDH23Q9H251 3354 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 KANSL1LA0AUZ9 987 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 GIPC1O14908 333 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 DCLK1O15075 740 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 FUT4P22083 530 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 PRKAA2P54646 552 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 DEFB103AP81534 67 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 PRKCQQ04759 706 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 STX5Q13190 355 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 ZNF460Q14592 562 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 NFE2Q16621 373 aaPredicted RBP17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 ARL13BQ3SXY8 428 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 PSTKQ8IV42 348 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms