RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 WNT3AP56704 352 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 MED22Q15528 200 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 ERI1Q8IV48 349 aaKnown RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 BBS4Q96RK4 519 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 COQ10BQ9H8M1 238 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 GLOD4Q9HC38 313 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 IFT80Q9P2H3 777 aaPredicted RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 VPS4AQ9UN37 437 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 POLR3HQ9Y535 204 aaPredicted RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 MYO5BQ9ULV0 1848 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 PLK4O00444 970 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 WNT10BO00744 389 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 BCKDKO14874 412 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 TULP3O75386 442 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 SLC5A3P53794 718 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 HECTD2Q5U5R9 776 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 ATL1Q8WXF7 558 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 QRFPRQ96P65 431 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 NLNQ9BYT8 704 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 SUV39H1O43463 412 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 RNASEH1O60930 286 aaKnown RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 FARP2O94887 1054 aaPredicted RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 ALDH2P05091 517 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 UNGP13051 313 aaPredicted RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 CAPGP40121 348 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 GJA8P48165 433 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 SPIBQ01892 262 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 LIPEQ05469 1076 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 ZFP69Q49AA0 526 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 VPS26BQ4G0F5 336 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 LYPLAL1Q5VWZ2 237 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 TATDN1Q6P1N9 297 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 KCTD8Q6ZWB6 473 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 RAB2BQ8WUD1 216 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 KCTD15Q96SI1 283 aaPredicted RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 GATA5Q9BWX5 397 aaPredicted RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 ASB8Q9H765 288 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 BCL9LQ86UU0 1499 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 H0YGN5 161 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 CATP04040 527 aaKnown RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 CYP2A13Q16696 494 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 ZC3H7AQ8IWR0 971 aaKnown RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 UNC5BQ8IZJ1 945 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 TWIST2Q8WVJ9 160 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 ALG2Q9H553 416 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 TOR4AQ9NXH8 423 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.86□□□□□ -0.35
COL3A1-201ENST00000304636 NFS1Q9Y697 457 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 PTCH2Q9Y6C5 1203 aa12.86□□□□□ -0.35
COL3A1-201ENST00000304636 MFSD11O43934 449 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 CD48P09326 243 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 CYP2A6P11509 494 aaPredicted RBP12.85□□□□□ -0.35
COL3A1-201ENST00000304636 PTPN3P26045 913 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 ARL4DP49703 201 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 CDK18Q07002 472 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 GRM3Q14832 879 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 TYSND1Q2T9J0 566 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 SLC4A9Q96Q91 983 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 SLC38A2Q96QD8 506 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 OGDHLQ9ULD0 1010 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 DOLKQ9UPQ8 538 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 FAM149AA5PLN7 773 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 PMM2O15305 246 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 NPHS1O60500 1241 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 IGFBP5P24593 272 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 GRM5P41594 1212 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 FSTL4Q6MZW2 842 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 TRIM48Q8IWZ4 208 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 CAMKK1Q8N5S9 505 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 LINGO1Q96FE5 620 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 DERAQ9Y315 318 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 BMP10O95393 424 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 CCNE2O96020 404 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 FSTL1Q12841 308 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 ZFAND2BQ8WV99 257 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 P2RX7Q99572 595 aaKnown RBP12.85□□□□□ -0.35
COL3A1-201ENST00000304636 GBA3Q9H227 469 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 CHRAC1Q9NRG0 131 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 PSMD11O00231 422 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 KPNA5O15131 536 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 B4GALT5O43286 388 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 ACLYP53396 1101 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 UGT2B15P54855 530 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 NDUFAF6Q330K2 333 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 EEF1DP3Q658K8 133 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 PMF1Q6P1K2 205 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 RIOX2Q8IUF8 465 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 ARMC8Q8IUR7 673 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 CERS5Q8N5B7 392 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 ARL10Q8N8L6 244 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 UBE2E3Q969T4 207 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 TSPAN18Q96SJ8 248 aa12.85□□□□□ -0.35
COL3A1-201ENST00000304636 MRPL45Q9BRJ2 306 aaKnown RBP12.85□□□□□ -0.35
COL3A1-201ENST00000304636 TTLL13PA6NNM8 815 aa12.84□□□□□ -0.35
COL3A1-201ENST00000304636 CXCL11O14625 94 aa12.84□□□□□ -0.35
COL3A1-201ENST00000304636 LPOP22079 712 aaPredicted RBP12.84□□□□□ -0.35
COL3A1-201ENST00000304636 SERPINA4P29622 427 aa12.84□□□□□ -0.35
COL3A1-201ENST00000304636 CCNFP41002 786 aa12.84□□□□□ -0.35
COL3A1-201ENST00000304636 CCR3P51677 355 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms