RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 PI4K2BG5E9Z4 385 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ATP2A1O14983 1001 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 LSM1O15116 133 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 GSC2O15499 205 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 RNF8O76064 485 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 CD63P08962 238 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 FAM58BPP0C7Q3 252 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 HNRNPCL4P0DMR1 293 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 KLRC2P26717 231 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 LIPAP38571 399 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 RABIFP47224 123 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 CD151P48509 253 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ATXN3P54252 364 aaPredicted RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 NFIAQ12857 509 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 PTP4A2Q12974 167 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 GAS6Q14393 721 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 LASP1Q14847 261 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 PCLAFQ15004 111 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 TCTN1Q2MV58 587 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 FAM214AQ32MH5 1076 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ALG10Q5BKT4 473 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ALG10BQ5I7T1 473 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ARHGEF16Q5VV41 709 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 TMEM88Q6PEY1 159 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 MOB3CQ70IA8 216 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ZNF397Q8NF99 534 aaPredicted RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 SLC35B2Q8TB61 432 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 PSPC1Q8WXF1 523 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 RAPGEF5Q92565 580 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 CAMK1GQ96NX5 476 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 DMRTA2Q96SC8 542 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 SIKE1Q9BRV8 207 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ABHD14AQ9BUJ0 271 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 TMEM168Q9H0V1 697 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 NAPBQ9H115 298 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 GSX1Q9H4S2 264 aaPredicted RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 GPR35Q9HC97 309 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 FSCN3Q9NQT6 498 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 DPP3Q9NY33 737 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 BTBD3Q9Y2F9 522 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ZNF536O15090 1300 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 RTL1A6NKG5 1358 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 A0A087WZ62 844 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ABLIM1O14639 778 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 SMPD2O60906 423 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 EPN2O95208 641 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ADRB2P07550 413 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 CHRM4P08173 479 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 TFEBP19484 476 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 FGFR4P22455 802 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 CD86P42081 329 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 NR0B1P51843 470 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 ASIC1P78348 528 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 MRPS5P82675 430 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 GIT2Q14161 759 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 PRKD1Q15139 912 aaPredicted RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 LRRC38Q5VT99 294 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 SHEQ5VZ18 495 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 SLC36A4Q6YBV0 504 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ANO5Q75V66 913 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 PLPPR4Q7Z2D5 763 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ZER1Q7Z7L7 766 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 KBTBD6Q86V97 674 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ZNF280BQ86YH2 543 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 PDCL2Q8N4E4 241 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ROBO4Q8WZ75 1007 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 OVCA2Q8WZ82 227 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 THOC1Q96FV9 657 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 LRIG1Q96JA1 1093 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 DACH2Q96NX9 599 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 SLC25A23Q9BV35 468 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 MTMR12Q9C0I1 747 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 IL23AQ9NPF7 189 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 MBNL1Q9NR56 388 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 ATAD3AQ9NVI7 634 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 DNAJC17Q9NVM6 304 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 TMOD2Q9NZR1 351 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 NXF1Q9UBU9 619 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 ERVK-11Q9UQG0 969 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 SIPA1L3O60292 1781 aaPredicted RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 ENO4A6NNW6 628 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 PSMD3O43242 534 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 PRDM1O75626 825 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 RECQL5O94762 991 aaPredicted RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 ZNF182P17025 639 aaPredicted RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 ANXA7P20073 488 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 RPA1P27694 616 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ZNF81P51508 661 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 HSD11B2P80365 405 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 HTD2P86397 168 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 NAE1Q13564 534 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 GAB4Q2WGN9 574 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 CRY2Q49AN0 593 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 SLC10A5Q5PT55 438 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 C10orf76Q5T2E6 689 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 RABEPKQ7Z6M1 372 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 RASAL3Q86YV0 1011 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 DNERQ8NFT8 737 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 IPMKQ8NFU5 416 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 OR10H5Q8NGA6 315 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms