RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 LAMTOR4Q0VGL1 99 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 SPANXN2Q5MJ10 180 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 ESRP1Q6NXG1 681 aaKnown RBP16.3■□□□□ 0.2
GPC1-201ENST00000264039 P2RY8Q86VZ1 359 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 HS3ST5Q8IZT8 346 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 MCOLN3Q8TDD5 553 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 EDEM1Q92611 657 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 ALPK1Q96QP1 1244 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 NTPCRQ9BSD7 190 aaKnown RBP16.3■□□□□ 0.2
GPC1-201ENST00000264039 G3V2T6 193 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 DYNC1LI2O43237 492 aaPredicted RBP16.3■□□□□ 0.2
GPC1-201ENST00000264039 TNFRSF21O75509 655 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 IFNA8P32881 189 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 GGT5P36269 586 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 PTPN9P43378 593 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 ASPAP45381 313 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 MAP2K4P45985 399 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 INPP1P49441 399 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 MTPNP58546 118 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 ZNF773Q6PK81 442 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 ANGPTL8Q6UXH0 198 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 PTGR2Q8N8N7 351 aaPredicted RBP16.3■□□□□ 0.2
GPC1-201ENST00000264039 TXNDC5Q8NBS9 432 aaKnown RBP16.3■□□□□ 0.2
GPC1-201ENST00000264039 TRPV3Q8NET8 790 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 DNAI2Q9GZS0 605 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 NUAK2Q9H093 628 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 RIPK3Q9Y572 518 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 IPPQ9Y573 584 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 SMCHD1A6NHR9 2005 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 MED26O95402 600 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 HMGCS2P54868 508 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 C1QTNF8P60827 252 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 RBP5P82980 135 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 CDH17Q12864 832 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 EPS8Q12929 822 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 ATG16L2Q8NAA4 619 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 C19orf60Q96EN9 201 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 TTYH2Q9BSA4 534 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 RHOJQ9H4E5 214 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 ADPRHL2Q9NX46 363 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 SPEF1Q9Y4P9 236 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 KRT87PA6NCN2 255 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 ZNF195O14628 629 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 ADIGQ0VDE8 80 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 WDR6Q9NNW5 1121 aaKnown RBP16.29■□□□□ 0.2
GPC1-201ENST00000264039 DUS2Q9NX74 493 aaKnown RBP16.29■□□□□ 0.2
GPC1-201ENST00000264039 MKS1Q9NXB0 559 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 ADAM28Q9UKQ2 775 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 PARP4Q9UKK3 1724 aaKnown RBP16.29■□□□□ 0.2
GPC1-201ENST00000264039 LYPLA2O95372 231 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 ERCC2P18074 760 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 MPZL3Q6UWV2 235 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 TBC1D21Q8IYX1 336 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 SCML4Q8N228 414 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 TMBIM1Q969X1 311 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 ZNHIT2Q9UHR6 403 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 TCAF1Q9Y4C2 921 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 BCORQ6W2J9 1755 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 GOLGA8CPA6NN73 597 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 NME4O00746 187 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 HCRTO43612 131 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 TSPAN9O75954 239 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 ANGPTL1O95841 491 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 AHSGP02765 367 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 AGXTP21549 392 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 MYF6P23409 242 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 GSK3BP49841 420 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 ILF2Q12905 390 aaKnown RBP16.29■□□□□ 0.2
GPC1-201ENST00000264039 SDE2Q6IQ49 451 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 NEPROQ6NW34 567 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 KIAA0408Q6ZU52 694 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 C1orf127Q8N9H9 656 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 NDNFQ8TB73 568 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 PPP1R13LQ8WUF5 828 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 LHX5Q9H2C1 402 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 ANGPTL3Q9Y5C1 460 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 PCDHB3Q9Y5E6 796 aa16.29■□□□□ 0.2
GPC1-201ENST00000264039 PEX10O60683 326 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 KATNA1O75449 491 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 FYNP06241 537 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 CPB1P15086 417 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 ITGB6P18564 788 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 HSDL1Q3SXM5 330 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 TJAP1Q5JTD0 557 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 AHSA2Q719I0 299 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 ZNF534Q76KX8 674 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 SMG8Q8ND04 991 aaKnown RBP16.28■□□□□ 0.2
GPC1-201ENST00000264039 KCNA7Q96RP8 456 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 KLK14Q9P0G3 267 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 FBXO5Q9UKT4 447 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 GPSM3Q9Y4H4 160 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 SNX10Q9Y5X0 201 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 SLC30A1Q9Y6M5 507 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 NUP98P52948 1817 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 SEMA3DO95025 777 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 SPPL2BQ8TCT7 592 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 QKIQ96PU8 341 aaKnown RBP eCLIP16.28■□□□□ 0.2
GPC1-201ENST00000264039 TMEM246Q9BRR3 403 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 CD320Q9NPF0 282 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 USP22Q9UPT9 525 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms