RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 WISP3O95389 354 aaPredicted RBP18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 FGBP02675 491 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 KLKB1P03952 638 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 HK2P52789 917 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 TIAL1Q01085 375 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 KLC3Q6P597 504 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 RNF111Q6ZNA4 994 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 AUTS2Q8WXX7 1259 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 EXT2Q93063 718 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 RCN3Q96D15 328 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 S100A14Q9HCY8 104 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 NDE1Q9NXR1 346 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 SPO11Q9Y5K1 396 aa18.73■□□□□ 0.59
PDLIM4-201ENST00000253754 RGSL1A5PLK6 1076 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 CD3EAPO15446 510 aaKnown RBP18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 MAP3K7O43318 606 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 GLP2RO95838 553 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 FGF1P05230 155 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 THRAP10827 490 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 IRF1P10914 325 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 HLA-DPA1P20036 260 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 DSG1Q02413 1049 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 C7orf61Q8IZ16 206 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 RYBPQ8N488 228 aaPredicted RBP18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 CPSF7Q8N684 471 aaKnown RBP18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 GABPB2Q8TAK5 448 aaPredicted RBP18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 WBP2Q969T9 261 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 PTERQ96BW5 349 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 ZNF840PA6NDX5 716 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 TSPAN3O60637 253 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 LUC7L3O95232 432 aaKnown RBP18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 SEC24AO95486 1093 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 SERPINF2P08697 491 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 SP100P23497 879 aaPredicted RBP18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 SCNN1BP51168 640 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 KPNA1P52294 538 aaPredicted RBP18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 ACVR1Q04771 509 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 CYLC2Q14093 348 aaPredicted RBP18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 ACAP2Q15057 778 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 CMPK2Q5EBM0 449 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 GALNT7Q86SF2 657 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 CUZD1Q86UP6 607 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 PPFIBP2Q8ND30 876 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 UCMAQ8WVF2 138 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 TRIB3Q96RU7 358 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 CCDC28BQ9BUN5 200 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 CXXC1Q9P0U4 656 aaPredicted RBP18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
PDLIM4-201ENST00000253754 UBFD1O14562 309 aaKnown RBP18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 MTTPP55157 894 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 FPGSQ05932 587 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 PPIGQ13427 754 aaKnown RBP eCLIP18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 BLMHQ13867 455 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 PPP1R3AQ16821 1122 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 C5orf22Q49AR2 442 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 ISCA2Q86U28 154 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 DSELQ8IZU8 1212 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 ZNF461Q8TAF7 563 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 BRSK1Q8TDC3 778 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 MGME1Q9BQP7 344 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 ZBED2Q9BTP6 218 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 ZBTB26Q9HCK0 441 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 COMMD8Q9NX08 183 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 RPP40O75818 363 aaKnown RBP18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 RBP1P09455 135 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 FDXRP22570 491 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 CORO1AP31146 461 aaKnown RBP18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 MSX2P35548 267 aaPredicted RBP18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 SLC11A2P49281 568 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 PTPRRQ15256 657 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 ARMC3Q5W041 872 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 MAELQ96JY0 434 aaKnown RBP18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 CINPQ9BW66 212 aaPredicted RBP18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 MAGEH1Q9H213 219 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 UBA2Q9UBT2 640 aaPredicted RBP18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 EYSQ5T1H1 3165 aa18.71■□□□□ 0.59
PDLIM4-201ENST00000253754 CHD9Q3L8U1 2897 aa18.71■□□□□ 0.58
PDLIM4-201ENST00000253754 FKBP6O75344 327 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 MT-CO1P00395 513 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 URODP06132 367 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 TUFMP49411 452 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 OXCT1P55809 520 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 CLEC6AQ6EIG7 209 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 DDX53Q86TM3 631 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 SNX31Q8N9S9 440 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 KYQ8NBH2 561 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 RP9Q8TA86 221 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 ZNF184Q99676 751 aaPredicted RBP18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 RNF38Q9H0F5 515 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 GSTO2Q9H4Y5 243 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 BATF3Q9NR55 127 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 POLR3BQ9NW08 1133 aaPredicted RBP18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 AFF4Q9UHB7 1163 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 A0A0U1RQS6 177 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 HMGA1P17096 107 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 CDH4P55283 916 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 LRRC36Q1X8D7 754 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 HECTD3Q5T447 861 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 ALG1LQ6GMV1 187 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 FAM45BPQ6NSW5 357 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms