RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 MTCH2Q9Y6C9 303 aa15.2■□□□□ 0.02
PAF1-201ENST00000221265 FCHO1O14526 889 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 TPP1O14773 563 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 CISD3P0C7P0 127 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 HOXB8P17481 243 aaPredicted RBP15.19■□□□□ 0.02
PAF1-201ENST00000221265 GM2AP17900 193 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 SLC6A11P48066 632 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 ECT2LQ008S8 904 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 NAB1Q13506 487 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 GRM2Q14416 872 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 KRT72Q14CN4 511 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 MBLAC2Q68D91 279 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 C16orf46Q6P387 395 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 TLDC1Q6P9B6 456 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 KYAT3Q6YP21 454 aaKnown RBP15.19■□□□□ 0.02
PAF1-201ENST00000221265 KIAA0907Q7Z7F0 614 aaPredicted RBP15.19■□□□□ 0.02
PAF1-201ENST00000221265 ALYREFQ86V81 257 aaKnown RBP15.19■□□□□ 0.02
PAF1-201ENST00000221265 DENND6AQ8IWF6 608 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.19■□□□□ 0.02
PAF1-201ENST00000221265 RAB3IL1Q8TBN0 382 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 KXD1Q9BQD3 176 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 CADM1Q9BY67 442 aaKnown RBP15.19■□□□□ 0.02
PAF1-201ENST00000221265 HPS4Q9NQG7 708 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 NKX1-2Q9UD57 310 aaPredicted RBP15.19■□□□□ 0.02
PAF1-201ENST00000221265 EMCNQ9ULC0 261 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 PCDHB9Q9Y5E1 797 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 ATG2BQ96BY7 2078 aa15.19■□□□□ 0.02
PAF1-201ENST00000221265 TCF20Q9UGU0 1960 aaKnown RBP15.18■□□□□ 0.02
PAF1-201ENST00000221265 HOXC11O43248 304 aaPredicted RBP15.18■□□□□ 0.02
PAF1-201ENST00000221265 TULP3O75386 442 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 ADH1CP00326 375 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 IRX4P78413 519 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 PDE1CQ14123 709 aaPredicted RBP15.18■□□□□ 0.02
PAF1-201ENST00000221265 PDPK2PQ6A1A2 396 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 C22orf39Q6P5X5 142 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 STRA8Q7Z7C7 330 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 SFTPA1Q8IWL2 248 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 RYBPQ8N488 228 aaPredicted RBP15.18■□□□□ 0.02
PAF1-201ENST00000221265 MDGA1Q8NFP4 955 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 OR13C4Q8NGS5 318 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 RPP25Q9BUL9 199 aaKnown RBP15.18■□□□□ 0.02
PAF1-201ENST00000221265 NMUR2Q9GZQ4 415 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 POMKQ9H5K3 350 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 SUDS3Q9H7L9 328 aaPredicted RBP15.18■□□□□ 0.02
PAF1-201ENST00000221265 ZFP14Q9HCL3 533 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.18■□□□□ 0.02
PAF1-201ENST00000221265 KIAA1549LQ6ZVL6 1849 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 ANKRD66B4E2M5 251 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 FZD6O60353 706 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 CCDC22O60826 627 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 PEX11AO75192 247 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 SLC4A1P02730 911 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 DGKGP49619 791 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 AP1S1P61966 158 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 STX3Q13277 289 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 CTBP1Q13363 440 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 DLG2Q15700 870 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 FASTKD1Q53R41 847 aaKnown RBP15.18■□□□□ 0.02
PAF1-201ENST00000221265 FAM91A1Q658Y4 838 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 CES5AQ6NT32 575 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 PARM1Q6UWI2 310 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 ZCCHC23Q6ZST2 131 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 Q6ZVU0 165 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 ETFBKMTQ8IXQ9 262 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 ACVR1CQ8NER5 493 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 OR2AP1Q8NGE2 309 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 FGF14Q92915 247 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 DNAJC1Q96KC8 554 aaKnown RBP15.18■□□□□ 0.02
PAF1-201ENST00000221265 BTBD10Q9BSF8 475 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 SLC2A11Q9BYW1 496 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 SLC25A13Q9UJS0 675 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 C15orf41Q9Y2V0 281 aa15.18■□□□□ 0.02
PAF1-201ENST00000221265 ARIH1Q9Y4X5 557 aaPredicted RBP15.18■□□□□ 0.02
PAF1-201ENST00000221265 F5P12259 2224 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 OR51F1A6NGY5 319 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 ITGA2BP08514 1039 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 KITP10721 976 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 GABRB3P28472 473 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 GMPRP36959 345 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 GP5P40197 560 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 ABL2P42684 1182 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 WASHC2DQ5SRD0 308 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 N4BP2L1Q5TBK1 243 aaPredicted RBP15.17■□□□□ 0.02
PAF1-201ENST00000221265 KIAA0930Q6ICG6 404 aaPredicted RBP15.17■□□□□ 0.02
PAF1-201ENST00000221265 RINLQ6ZS11 566 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 CRLF3Q8IUI8 442 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 AHI1Q8N157 1196 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 BRSK1Q8TDC3 778 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 HDAC10Q969S8 669 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 MRGPRX3Q96LB0 322 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 CPNE1Q99829 537 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 CIPCQ9C0C6 399 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 MTG2Q9H4K7 406 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 DENND2DQ9H6A0 471 aaPredicted RBP15.17■□□□□ 0.02
PAF1-201ENST00000221265 GTSE1Q9NYZ3 720 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 ARMCX1Q9P291 453 aa15.17■□□□□ 0.02
PAF1-201ENST00000221265 GSC2O15499 205 aa15.16■□□□□ 0.02
PAF1-201ENST00000221265 PLIN3O60664 434 aa15.16■□□□□ 0.02
PAF1-201ENST00000221265 DIAPH2O60879 1101 aa15.16■□□□□ 0.02
PAF1-201ENST00000221265 GLRA3O75311 464 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms