RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TRIP12Q14669 1992 aaPredicted RBP14.05□□□□□ -0.16
USH1C-201ENST00000005226 UBXN8O00124 270 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 EI24O14681 340 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 GIPC1O14908 333 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 ZSCAN9O15535 394 aaPredicted RBP14.05□□□□□ -0.16
USH1C-201ENST00000005226 B4GAT1O43505 415 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 CASP2P42575 452 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 ESRRGP62508 458 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 FGD3Q5JSP0 725 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 FASTKD5Q7L8L6 764 aaKnown RBP14.05□□□□□ -0.16
USH1C-201ENST00000005226 LYSMD3Q7Z3D4 306 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 TFAP2DQ7Z6R9 452 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 ANKRD13AQ8IZ07 590 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 PTGR2Q8N8N7 351 aaPredicted RBP14.05□□□□□ -0.16
USH1C-201ENST00000005226 OR13J1Q8NGT2 312 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 HM13Q8TCT9 377 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 STON2Q8WXE9 905 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 MYLPFQ96A32 169 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 UBXN10Q96LJ8 280 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 NPLQ9BXD5 320 aaPredicted RBP14.05□□□□□ -0.16
USH1C-201ENST00000005226 PAIP1Q9H074 479 aaKnown RBP14.05□□□□□ -0.16
USH1C-201ENST00000005226 CXorf21Q9HAI6 301 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 ENTPD7Q9NQZ7 604 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 ZNF510Q9Y2H8 683 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 GMEB1Q9Y692 573 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 A0A087WXM4 84 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 FAM155AB1AL88 458 aaPredicted RBP14.04□□□□□ -0.16
USH1C-201ENST00000005226 FXYD1O00168 92 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 AP3B1O00203 1094 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 CDK14O94921 469 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 RBP1P09455 135 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 CD86P42081 329 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 KPNA2P52292 529 aaKnown RBP14.04□□□□□ -0.16
USH1C-201ENST00000005226 DIO3P55073 304 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 TNK2Q07912 1038 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 NEDD8Q15843 81 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 PFKFB4Q16877 469 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 ZBED5Q49AG3 693 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 DUSP28Q4G0W2 176 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 ALDH16A1Q8IZ83 802 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 BBS5Q8N3I7 341 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 GPRC5AQ8NFJ5 357 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 MAGEE2Q8TD90 523 aaPredicted RBP14.04□□□□□ -0.16
USH1C-201ENST00000005226 TRPC4APQ8TEL6 797 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 EMID1Q96A84 441 aaPredicted RBP14.04□□□□□ -0.16
USH1C-201ENST00000005226 DUS3LQ96G46 650 aaKnown RBP14.04□□□□□ -0.16
USH1C-201ENST00000005226 GPATCH1Q9BRR8 931 aaKnown RBP14.04□□□□□ -0.16
USH1C-201ENST00000005226 TUBB1Q9H4B7 451 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 POLR1BQ9H9Y6 1135 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 ARMC1Q9NVT9 282 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 SLAMF8Q9P0V8 285 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 J3KR12 359 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 CLOCKO15516 846 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 PIRTP0C851 137 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 PRSS56P0CW18 603 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 TUBA4AP68366 448 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 DSC2Q02487 901 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 CACNB2Q08289 660 aaPredicted RBP14.04□□□□□ -0.16
USH1C-201ENST00000005226 ACAP2Q15057 778 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 KCTD21Q4G0X4 260 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 CAMK1DQ8IU85 385 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 GIPC3Q8TF64 312 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 NUDT8Q8WV74 236 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 TUBGCP3Q96CW5 907 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 TEX37Q96LM6 180 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 TMEM74Q96NL1 305 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 PPP1R10Q96QC0 940 aaKnown RBP14.04□□□□□ -0.16
USH1C-201ENST00000005226 SEPHS2Q99611 448 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 KCNH4Q9UQ05 1017 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 TIMM22Q9Y584 194 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 SQORQ9Y6N5 450 aa14.04□□□□□ -0.16
USH1C-201ENST00000005226 RBM47A0AV96 593 aaKnown RBP14.03□□□□□ -0.16
USH1C-201ENST00000005226 ANGPT2O15123 496 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 ARPC2O15144 300 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 IL10P22301 178 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 SLC6A2P23975 617 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 POLD2P49005 469 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 CCR3P51677 355 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 NAA20P61599 178 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 CYP51A1Q16850 503 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 PLA2G4EQ3MJ16 856 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 ZIK1Q3SY52 487 aaPredicted RBP14.03□□□□□ -0.16
USH1C-201ENST00000005226 ADGRG5Q8IZF4 528 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 PCYOX1LQ8NBM8 494 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 PLGRKTQ9HBL7 147 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 AGPAT4Q9NRZ5 378 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 DOLKQ9UPQ8 538 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 PDCD11Q14690 1871 aaKnown RBP14.03□□□□□ -0.16
USH1C-201ENST00000005226 OTOFQ9HC10 1997 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 RRN3P2A6NIE6 340 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 ACOX3O15254 700 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 KPNA6O60684 536 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 SNAP29O95721 258 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 S1PR4O95977 384 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 HGFP14210 728 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 MYF6P23409 242 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 FASP25445 335 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 DNAJB1P25685 340 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 VARSP26640 1264 aaKnown RBP14.03□□□□□ -0.16
USH1C-201ENST00000005226 LEPRP48357 1165 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms