RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 RCN3Q96D15 328 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 PCDHGA6Q9Y5G7 932 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 TNS2Q63HR2 1409 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 OTOFQ9HC10 1997 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 KHNYNO15037 678 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ELK3P41970 407 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 C1QBPQ07021 282 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 VWA5B1Q5TIE3 1220 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 LRRN1Q6UXK5 716 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 FAM20CQ8IXL6 584 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ASCC1Q8N9N2 400 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 SUN3Q8TAQ9 357 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 USP7Q93009 1102 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 TMEM237Q96Q45 408 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 AGO2Q9UKV8 859 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 KLRC1P26715 233 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 MAGEB1P43366 347 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 NOMO3P69849 1222 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 NOMO1Q15155 1222 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 CCNG2Q16589 344 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 C11orf96Q7Z7L8 435 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ARMC8Q8IUR7 673 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 SEMA6DQ8NFY4 1073 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 IRX2Q9BZI1 471 aaPredicted RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 PCIF1Q9H4Z3 704 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 RC3H2Q9HBD1 1191 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 GPRC5BQ9NZH0 403 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 AP4E1Q9UPM8 1137 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 MST1RQ04912 1400 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 UMODL1Q5DID0 1318 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 FAM205AQ6ZU69 1335 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF185O15231 689 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 UGT1A5P35504 534 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ALDH3B1P43353 468 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ITGA8P53708 1063 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 GALK2Q01415 458 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 WSCD2Q2TBF2 565 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 FNBP1LQ5T0N5 605 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 SCARA5Q6ZMJ2 495 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 SLC4A11Q8NBS3 891 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 GANQ9H2C0 597 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF230Q9UIE0 474 aaPredicted RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ALG6Q9Y672 507 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 SPATA31A1Q5TZJ5 1347 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 THNSL1Q8IYQ7 743 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 TTLL6Q8N841 843 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 SEC14L1Q92503 715 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF341Q9BYN7 854 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ARMC1Q9NVT9 282 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 SLC1A6P48664 564 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 IL2P60568 153 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 MROH9Q5TGP6 573 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 NUP54Q7Z3B4 507 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 TRPM4Q8TD43 1214 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 ATL1Q8WXF7 558 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 DCPSQ96C86 337 aaKnown RBP9.29□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF597Q96LX8 424 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 ANKRA2Q9H9E1 313 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 WDR6Q9NNW5 1121 aaKnown RBP9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PLEKHM1Q9Y4G2 1056 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 SIGLEC1Q9BZZ2 1709 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 BCL9O00512 1426 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 HLA-DQA2P01906 255 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 EPB42P16452 691 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 TAS2R39P59534 338 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 CD83Q01151 205 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PRKCZQ05513 592 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 ITGA11Q9UKX5 1188 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PSMA1P25786 263 aaKnown RBP9.29□□□□□ -0.92
COL12A1-211ENST00000615798 ATG9BQ674R7 924 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PBDC1Q9BVG4 233 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 SAGE1Q9NXZ1 904 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 TAS2R7Q9NYW3 318 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 ABCD2Q9UBJ2 740 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 OR6C6A6NF89 314 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 AGRPO00253 132 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PRKAA1Q13131 559 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PDK1Q15118 436 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 SMAD1Q15797 465 aaKnown RBP9.29□□□□□ -0.92
COL12A1-211ENST00000615798 TTLL9Q3SXZ7 439 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PNKPQ96T60 521 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 AP1M2Q9Y6Q5 423 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PCDH1Q08174 1060 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 UAP1L1Q3KQV9 507 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 GALNT7Q86SF2 657 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 DSELQ8IZU8 1212 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 COQ8AQ8NI60 647 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 C7orf50Q9BRJ6 194 aaKnown RBP9.29□□□□□ -0.92
COL12A1-211ENST00000615798 CLPBQ9H078 707 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PIF1Q9H611 641 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 ANKHQ9HCJ1 492 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 SORCS3Q9UPU3 1222 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 NDUFAF1Q9Y375 327 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PCDHGB6Q9Y5F9 930 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 CASP1P29466 404 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 RORCP51449 518 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 UGT2B15P54855 530 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 RPL10AP62906 217 aaKnown RBP9.29□□□□□ -0.92
COL12A1-211ENST00000615798 GCNT1Q02742 428 aa9.29□□□□□ -0.92
COL12A1-211ENST00000615798 PTPN21Q16825 1174 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms