RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SNX24Q9Y343 169 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PCDHGC4Q9Y5F7 938 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CACNA1EQ15878 2313 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ASCC3Q8N3C0 2202 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TCRBV7S3A2A0A539 114 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 LNP1A1A4G5 178 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TTC24A2A3L6 582 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 C10orf142B7Z368 130 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CDX4O14627 284 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SYNCRIPO60506 623 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 LEFTY1O75610 366 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NDST3O95803 873 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 IGLV3-19P01714 112 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 APRTP07741 180 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ATXN1LP0C7T5 689 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 HOXB2P14652 356 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 HLA-DPA1P20036 260 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 C5AR1P21730 350 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ITGB7P26010 798 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 BASP1P80723 227 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 GUCY2DQ02846 1103 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SRSF1Q07955 248 aaKnown RBP eCLIP11.2□□□□□ -0.626e-7■■□□□ 13.5
CDK5RAP3-204ENST00000577664 TRAF2Q12933 501 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 STARD3Q14849 445 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SLC1A5Q15758 541 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ARSIQ5FYB1 569 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 FAM182AQ5T1J6 154 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZDHHC24Q6UX98 284 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZNF534Q76KX8 674 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CAND1Q86VP6 1230 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CAMK1DQ8IU85 385 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RELL1Q8IUW5 271 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CBARPQ8N350 705 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 HNRNPLLQ8WVV9 542 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SLC39A7Q92504 469 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PRCCQ92733 491 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SCRN2Q96FV2 425 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MCCC1Q96RQ3 725 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ADGRE3Q9BY15 652 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TSPYL1Q9H0U9 437 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MTG2Q9H4K7 406 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ANAPC5Q9UJX4 755 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SARDHQ9UL12 918 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RAB21Q9UL25 225 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PHTF1Q9UMS5 762 aa11.2□□□□□ -0.62
CDK5RAP3-204ENST00000577664 E7ESA3 106 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 J3QKU1 62 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 EIF3HO15372 352 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RNASEH1O60930 286 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PMPCBO75439 489 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RPP40O75818 363 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TMEM63AO94886 807 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ADH1BP00325 375 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 AGTP01019 485 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 FGF1P05230 155 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PDHA1P08559 390 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ECHS1P30084 290 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 GRIA4P48058 902 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NPY2RP49146 381 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ITGA8P53708 1063 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RPS14P62263 151 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MRPS25P82663 173 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CCDC15Q0P6D6 951 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CDH17Q12864 832 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CALCOCO2Q13137 446 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TRADDQ15628 312 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 UGP2Q16851 508 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ARMC12Q5T9G4 340 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ANKRD22Q5VYY1 191 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 IZUMO3Q5VZ72 239 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PKN3Q6P5Z2 889 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PPP1R21Q6ZMI0 780 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CCNI2Q6ZMN8 369 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 Q6ZS52 159 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 USP30Q70CQ3 517 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RASSF3Q86WH2 238 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TMPRSS6Q8IU80 811 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZCCHC9Q8N567 271 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CAMKK1Q8N5S9 505 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZNF366Q8N895 744 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MYRIPQ8NFW9 859 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PIP4K2CQ8TBX8 421 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RAB7BQ96AH8 199 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 LRRC39Q96DD0 335 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TBL1YQ9BQ87 522 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MKRN2Q9H000 416 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MAGEE1Q9HCI5 957 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 XAB2Q9HCS7 855 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 POLMQ9NP87 494 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TMEM9BQ9NQ34 198 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 UBP1Q9NZI7 540 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 EBF1Q9UH73 591 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RIMKLBQ9ULI2 386 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TTLL3Q9Y4R7 772 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PTPN13Q12923 2485 aa11.19□□□□□ -0.62
CDK5RAP3-204ENST00000577664 URB1O60287 2271 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 A0A0J9YYE9 177 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MAGEB16A2A368 324 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 C16orf96A6NNT2 1141 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 E7EVH7 732 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms