RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ACTRT2Q8TDY3 377 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 WDR60Q8WVS4 1066 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 TOP1MTQ969P6 601 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 RMDN1Q96DB5 314 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 DNAJC1Q96KC8 554 aaKnown RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 SYTL2Q9HCH5 934 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 MAN1C1Q9NR34 630 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 SLC7A8Q9UHI5 535 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 ANGPTL2Q9UKU9 493 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 SSX2IPQ9Y2D8 614 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 LRRC42Q9Y546 428 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 CCDC162PA2VCL2 907 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 H0Y3Z8 333 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 CBX4O00257 560 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 SMIM24O75264 130 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 FKBP6O75344 327 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 CCL5P13501 91 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 IMPDH1P20839 514 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 PSMA3P25788 255 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 VHLP40337 213 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 SUOXP51687 545 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 STC1P52823 247 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 PGGT1BP53609 377 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 AP2B1P63010 937 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 NFKB2Q00653 900 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 CREMQ03060 361 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 HERC3Q15034 1050 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 INO80DQ53TQ3 878 aaPredicted RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 CMPK2Q5EBM0 449 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 GLT6D1Q7Z4J2 308 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 TCEAL8Q8IYN2 117 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 KDM1BQ8NB78 822 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 CEP70Q8NHQ1 597 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 FBXO27Q8NI29 283 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 USP13Q92995 863 aaPredicted RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 CDKN2AIPNLQ96HQ2 116 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 OR52B2Q96RD2 323 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 TDRD1Q9BXT4 1180 aaKnown RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 NUF2Q9BZD4 464 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 GKN1Q9NS71 199 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 MARCH4Q9P2E8 410 aaPredicted RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 KCTD3Q9Y597 815 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 TANC1Q9C0D5 1861 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 A0A088AWK7 358 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 A8MT66 165 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 CCNT2O60583 730 aaKnown RBP11.3□□□□□ -0.6
CLPX-204ENST00000559152 EFCAB14O75071 495 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 LUC7L3O95232 432 aaKnown RBP11.3□□□□□ -0.6
CLPX-204ENST00000559152 MBL2P11226 248 aaPredicted RBP11.3□□□□□ -0.6
CLPX-204ENST00000559152 CDKN2DP55273 166 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 NAA20P61599 178 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 SLC25A3Q00325 362 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 CYTH1Q15438 398 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 RNF219Q5W0B1 726 aaPredicted RBP11.3□□□□□ -0.6
CLPX-204ENST00000559152 TLDC1Q6P9B6 456 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 AAGABQ6PD74 315 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 C16orf89Q6UX73 402 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 RIPOR1Q6ZS17 1223 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 RAB44Q7Z6P3 723 aaPredicted RBP11.3□□□□□ -0.6
CLPX-204ENST00000559152 DNAJB7Q7Z6W7 309 aaPredicted RBP11.3□□□□□ -0.6
CLPX-204ENST00000559152 DDX53Q86TM3 631 aaKnown RBP11.3□□□□□ -0.6
CLPX-204ENST00000559152 MFN1Q8IWA4 741 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 PHTF2Q8N3S3 785 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 POU5F2Q8N7G0 328 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 PPFIBP2Q8ND30 876 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 RHEBL1Q8TAI7 183 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 L3HYPDHQ96EM0 354 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 SGF29Q96ES7 293 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 MAELQ96JY0 434 aaKnown RBP11.3□□□□□ -0.6
CLPX-204ENST00000559152 RNF38Q9H0F5 515 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 CCDC68Q9H2F9 335 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 WDR55Q9H6Y2 383 aaPredicted RBP11.3□□□□□ -0.6
CLPX-204ENST00000559152 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLPX-204ENST00000559152 SPG21Q9NZD8 308 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 HACD3Q9P035 362 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 CRYL1Q9Y2S2 319 aa11.3□□□□□ -0.6
CLPX-204ENST00000559152 LOC100653049A0A140TA62 436 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 CCDC189A1A4V9 331 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 H0Y626 953 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 NEMP1O14524 444 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 ZBTB14O43829 449 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 KRT34O76011 436 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 C1RP00736 705 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 LPOP22079 712 aaPredicted RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 EPHA3P29320 983 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 ZNF140P52738 457 aaPredicted RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 TWF1Q12792 350 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 CUL3Q13618 768 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 TAF11Q15544 211 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 TRIM60Q495X7 471 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 GPR158Q5T848 1215 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 ISCA2Q86U28 154 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 CMTR2Q8IYT2 770 aaKnown RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 HJURPQ8NCD3 748 aaPredicted RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 OR52K2Q8NGK3 314 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 OR13C4Q8NGS5 318 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 JADE3Q92613 823 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 ZNF689Q96CS4 500 aaPredicted RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 SERPINI1Q99574 410 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms